Lus10041023.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10041023.g T008928_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.754 0.941
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.754 0.941
SHN2
M06660_2.00
Arabidopsis thaliana
DCCDCCRCCDCCDCCRCCRCY

RGYGGYGGHGGHGGYGGHGGH
Dap-seq
OMalley et al.(2016)
SHN3_col_a
0.678 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10041023 AP2 6 57

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

Invalid Input OrderBy

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action