Lus10041052.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10041052.g T008931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10041052 AP2 17 67

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.693
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.712
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.701
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.706
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.719
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.727
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.704
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.704
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.703
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.694
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.689
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.712
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.741
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.718
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.705
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.691
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.697
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.743
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.788
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.697
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.729
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.752
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.718
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.702
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.702
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.718
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.752
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.693
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.689
MDP0000283350 Malus domestica MDP0000283350 I 0.691
MDP0000151428 Malus domestica MDP0000151428 I 0.729
MDP0000122740 Malus domestica MDP0000122740 I 0.729
MDP0000122739 Malus domestica MDP0000122739 I 0.729
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.702
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.709
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.747
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.704
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.752
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.732
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.697
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.715
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.717
OB11G16300 Oryza brachyantha OB11G16300 I 0.677
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.697
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.697
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.697
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.733
Bra028009 Brassica rapa Bra028009 I 0.735
Bra010210 Brassica rapa Bra010210 I 0.749
Bo8g027240 Brassica oleracea Bo8g027240 I 0.735
Bo6g046850 Brassica oleracea Bo6g046850 I 0.729
Bo5g086680 Brassica oleracea Bo5g086680 I 0.746
ERF022 Arabidopsis thaliana AT1G33760 I 0.730
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.699
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.702
28118.m000034 Ricinus communis 28118.m000034 I 0.713
27805.m000021 Ricinus communis 27805.m000021 I 0.743
Pm004272 Prunus mume Pm004272 I 0.733
Pm004269 Prunus mume Pm004269 I 0.697
Cla012665 Citrullus lanatus Cla012665 I 0.696
Cla012661 Citrullus lanatus Cla012661 I 0.705
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.709
TCM_036270 Theobroma cacao TCM_036270 I 0.746
TCM_036269 Theobroma cacao TCM_036269 I 0.725
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.698
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.686
Si026882m.g Setaria italica Si026882m.g I 0.682
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.728
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.733
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.697
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.752
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.714
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.752