MDP0000122739 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000122739 T008950_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.704 0.740
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.704 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000122739 AP2 13 64

Links

Other AP2 family TFs
Other Malus domestica TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27805.m000021 Ricinus communis 27805.m000021 I 0.737
28118.m000034 Ricinus communis 28118.m000034 I 0.721
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.709
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.712
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.715
Bo2g072910 Brassica oleracea Bo2g072910 I 0.704
Bo5g086680 Brassica oleracea Bo5g086680 I 0.723
Bo6g046850 Brassica oleracea Bo6g046850 I 0.715
Bo6g113020 Brassica oleracea Bo6g113020 I 0.698
Bo8g027240 Brassica oleracea Bo8g027240 I 0.749
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.731
Bra007975 Brassica rapa Bra007975 I 0.704
Bra010210 Brassica rapa Bra010210 I 0.726
Bra016136 Brassica rapa Bra016136 I 0.698
Bra028009 Brassica rapa Bra028009 I 0.721
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.715
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.704
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.729
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.725
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.704
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.732
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.743
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.732
Ca_15064 Cicer arietinum Ca_15064 I 0.698
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.732
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.745
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.724
Cla012661 Citrullus lanatus Cla012661 I 0.744
Cla012665 Citrullus lanatus Cla012665 I 0.731
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.726
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.744
ERF021 Arabidopsis thaliana AT1G71450 D 0.704
ERF022 Arabidopsis thaliana AT1G33760 I 0.743
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.729
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.743
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.752
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.739
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.763
F775_17299 Aegilops tauschii F775_17299 I 0.715
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.704
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.788
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.741
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.729
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.732
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.732
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.723
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.747
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.720
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.707
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.715
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.704
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.717
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.737
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.702
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.710
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.705
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.729
MDP0000122740 Malus domestica MDP0000122740 I 0.826
MDP0000151428 Malus domestica MDP0000151428 I 0.826
MDP0000283350 Malus domestica MDP0000283350 I 0.726
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.715
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.714
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.732
OB11G16300 Oryza brachyantha OB11G16300 I 0.715
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.715
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.715
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.715
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.715
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.724
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.715
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.715
OS11G0242300 Oryza sativa OS11G0242300 I 0.715
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.715
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.715
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.752
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.748
Pm004269 Prunus mume Pm004269 I 0.732
Pm004272 Prunus mume Pm004272 I 0.787
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.752
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.727
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.748
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.735
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.737
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.748
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.732
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.785
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.729
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.748
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.750
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.737
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.737
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.750
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.748
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.715
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.729
Si026882m.g Setaria italica Si026882m.g I 0.735
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.727
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.733
TCM_036269 Theobroma cacao TCM_036269 I 0.760
TCM_036270 Theobroma cacao TCM_036270 I 0.724
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.742
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.701
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.683
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.715
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.715
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.715
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.682
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.715
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.776
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.695