MDP0000127054 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000127054 T008956_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.857 0.980
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.857 0.980
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000127054 AP2 6 57

Links

Other AP2 family TFs
Other Malus domestica TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARGFX Homo sapiens ENSG00000186103 D 0.000
ARGFX Bos taurus ENSBTAG00000002273 I 0.000
ARGFX Tupaia belangeri ENSTBEG00000015401 I 0.000
ARGFX Tursiops truncatus ENSTTRG00000001349 I 0.000
Smp_171380 Schistosoma mansoni Smp_171380 I 0.000
ENSMMUP00000021529 Macaca fascicularis ENSMMUP00000021529 I 0.000
ENSP00000335578-D1 Bos grunniens ENSP00000335578-D1 I 0.000
CGOC_0000645001 Cylicostephanus goldi CGOC_0000645001 I 0.000
EEL_0000436201 Elaeophora elaphi EEL_0000436201 I 0.000
MhA1_Contig726.frz3.gene2 Meloidogyne hapla MhA1_Contig726.frz3.gene2 I 0.000
PXEA_0000230101 Protopolystoma xenopodis PXEA_0000230101 I 0.000
SMTD_0002261301 Schistosoma mattheei SMTD_0002261301 I 0.000
SROB_0002221601 Schistosoma rodhaini SROB_0002221601 I 0.000
TELCIR_21719 Teladorsagia circumcincta TELCIR_21719 I 0.000
ENSSSCG00000011886 Sus scrofa ENSSSCG00000011886 I 0.000
ARGFX Pan troglodytes ENSPTRG00000015277 I 0.000
ENSPPYG00000008158 Pongo abelii ENSPPYG00000008158 I 0.000
ARGFX Callithrix jacchus ENSCJAG00000008507 I 0.000
ENSCPOG00000006393 Cavia porcellus ENSCPOG00000006393 I 0.000
ARGFX Dasypus novemcinctus ENSDNOG00000031231 I 0.000
ARGFX Equus caballus ENSECAG00000013996 I 0.000
ARGFX Gorilla gorilla ENSGGOG00000005362 I 0.000
ARGFX Macaca mulatta ENSMMUG00000016395 I 0.000
ENSNLEG00000013255 Nomascus leucogenys ENSNLEG00000013255 I 0.000
ENSOARG00000020026 Ovis aries ENSOARG00000020026 I 0.000
ARGFX Oryctolagus cuniculus ENSOCUG00000008795 I 0.000
ARGFX Otolemur garnettii ENSOGAG00000002406 I 0.000
ENSOPRG00000012148 Ochotona princeps ENSOPRG00000012148 I 0.000
ENSPANG00000009686 Papio anubis ENSPANG00000009686 I 0.000
TRE_0001559401 Trichobilharzia regenti TRE_0001559401 I 0.000