MDP0000141335 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000141335 T008971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.768 0.939
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.768 0.939
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.768 0.939
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.721 0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.684 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000141335 AP2 46 97

Links

Other AP2 family TFs
Other Malus domestica TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR01G32380 Leersia perrieri LPERR01G32380 N 0.000
OBART07G07450 Oryza barthii OBART07G07450 N 0.000
OBART07G08680 Oryza barthii OBART07G08680 N 0.000
OB01G46450 Oryza brachyantha OB01G46450 N 0.000
ORGLA01G0315200 Oryza glaberrima ORGLA01G0315200 N 0.000
ORGLA07G0062800 Oryza glaberrima ORGLA07G0062800 N 0.000
ORGLA07G0073600 Oryza glaberrima ORGLA07G0073600 N 0.000
OGLUM07G07150 Oryza glumaepatula OGLUM07G07150 N 0.000
OGLUM07G07870 Oryza glumaepatula OGLUM07G07870 N 0.000
BGIOSGA004824 Oryza indica BGIOSGA004824 N 0.000
BGIOSGA025449 Oryza indica BGIOSGA025449 N 0.000
BGIOSGA024590 Oryza indica BGIOSGA024590 N 0.000
OLONG_012136 Oryza longistaminata OLONG_012136 N 0.000
OLONG_021151 Oryza longistaminata OLONG_021151 N 0.000
OLONG_023640 Oryza longistaminata OLONG_023640 N 0.000
OMERI07G07070 Oryza meridionalis OMERI07G07070 N 0.000
ONIVA07G07540 Oryza nivara ONIVA07G07540 N 0.000
ONIVA07G05990 Oryza nivara ONIVA07G05990 N 0.000
ONIVA07G05980 Oryza nivara ONIVA07G05980 N 0.000
ONIVA01G42540 Oryza nivara ONIVA01G42540 N 0.000
OPUNC01G36560 Oryza punctata OPUNC01G36560 N 0.000
OPUNC07G07180 Oryza punctata OPUNC07G07180 N 0.000
OPUNC07G08180 Oryza punctata OPUNC07G08180 N 0.000
ORUFI07G08780 Oryza rufipogon ORUFI07G08780 N 0.000
ORUFI07G07460 Oryza rufipogon ORUFI07G07460 N 0.000
ORUFI07G07450 Oryza rufipogon ORUFI07G07450 N 0.000
ORUFI01G41050 Oryza rufipogon ORUFI01G41050 N 0.000
OS01G0855400 Oryza sativa OS01G0855400 N 0.000
Pavir.J13941 Panicum virgatum Pavir.J13941 N 0.000
Sb01g013830 Sorghum bicolor Sb01g013830 N 0.000
GRMZM2G121570 Zea mays GRMZM2G121570 N 0.000