CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000153445
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000153445
T008978_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.717
0.729
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.706
0.812
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.706
0.812
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.706
0.812
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000153445
AP2
128
180
QHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEGAALAYDQAAFKIRGX
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy