MDP0000157628 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000157628 T008984_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.705 0.725
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.705 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000157628 AP2 31 82

Links

Other AP2 family TFs
Other Malus domestica TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000197375 Malus domestica MDP0000197375 I 0.820
Pm030235 Prunus mume Pm030235 I 0.805
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.805
TCM_014471 Theobroma cacao TCM_014471 I 0.793
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.783
30174.m009031 Ricinus communis 30174.m009031 I 0.775
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.775
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.772
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.762
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.759
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.759
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.756
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.753
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.753
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.750
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.747
PK28640.1 Cannabis sativa PK28640.1 I 0.747
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.743
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.742
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.736
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.734
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.733
PK25269.1 Cannabis sativa PK25269.1 I 0.733
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.730
30174.m008961 Ricinus communis 30174.m008961 I 0.730
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.730
TCM_005425 Theobroma cacao TCM_005425 I 0.730
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.730
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.730
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.730
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.730
Pm008788 Prunus mume Pm008788 I 0.730
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.730
MDP0000138669 Malus domestica MDP0000138669 I 0.730
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.730
MDP0000133476 Malus domestica MDP0000133476 I 0.730
mgf018851m Mimulus guttatus mgf018851m I 0.730
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.730
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.729
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.729
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.729
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.729
TCM_011632 Theobroma cacao TCM_011632 I 0.729
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.727
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.727
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.727
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.727
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.727
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.727
Si038848m.g Setaria italica Si038848m.g I 0.727
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.727
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.727
PK13330.1 Cannabis sativa PK13330.1 I 0.727
Pm015931 Prunus mume Pm015931 I 0.727
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.727
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.727
Ca_10494 Cicer arietinum Ca_10494 I 0.727
TCM_018659 Theobroma cacao TCM_018659 I 0.727
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.727
Si024417m.g Setaria italica Si024417m.g I 0.727
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.727
Cla010474 Citrullus lanatus Cla010474 I 0.727
29635.m000461 Ricinus communis 29635.m000461 I 0.727
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.727
F775_02727 Aegilops tauschii F775_02727 I 0.727
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.727
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.727
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.727
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.727
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.727
OBART12G17080 Oryza barthii OBART12G17080 I 0.727
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.727
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.727
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.727
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.727
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.727
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.727
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.727
OS12G0582900 Oryza sativa OS12G0582900 I 0.727
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.727
MDP0000551969 Malus domestica MDP0000551969 I 0.727
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.727
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.727
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.727
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.727
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.727
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.727
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.727
MDP0000276536 Malus domestica MDP0000276536 I 0.727
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.727
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.727
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.727
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.727
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.727
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.726
29813.m001543 Ricinus communis 29813.m001543 I 0.726
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.726
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.726
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.726
Si032213m.g Setaria italica Si032213m.g I 0.724
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.724
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.724
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.724
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.723
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.722
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.722
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.722
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.722
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.721
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.720
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.719
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.719
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.719
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.718
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.718
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.718
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.718
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.717
Ca_06590 Cicer arietinum Ca_06590 N 0.716
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.716
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.715
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.714
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.714
Ca_16397 Cicer arietinum Ca_16397 I 0.714
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.714
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.714
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.713
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.713
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.711
Ca_25424 Cicer arietinum Ca_25424 I 0.711
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.710
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.709
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.709
Gorai.001G064900 Gossypium raimondii Gorai.001G064900 N 0.708
mgf022665m Mimulus guttatus mgf022665m I 0.708
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.706
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.705
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.705
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.705
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.705
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.705
MDP0000177547 Malus domestica MDP0000177547 I 0.705
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.705
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.705
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.705
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.705
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.705
Ca_08232 Cicer arietinum Ca_08232 I 0.705
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.705
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.705
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.705
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.705
OBART07G06690 Oryza barthii OBART07G06690 I 0.705
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.705
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.705
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.705
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.705
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.705
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.705
OS07G0204000 Oryza sativa OS07G0204000 I 0.705
OB07G15030 Oryza brachyantha OB07G15030 I 0.705
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.705
Bo3g013830 Brassica oleracea Bo3g013830 I 0.705
Bo9g152440 Brassica oleracea Bo9g152440 I 0.705
Bo2g018360 Brassica oleracea Bo2g018360 I 0.705
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.705
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.705
Bra002262 Brassica rapa Bra002262 I 0.705
Bra006518 Brassica rapa Bra006518 I 0.705
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.705
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.705
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.705
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.705
Bra020063 Brassica rapa Bra020063 I 0.705
Si033237m.g Setaria italica Si033237m.g I 0.705
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.705
Pm025326 Prunus mume Pm025326 I 0.705
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.705
TCM_025913 Theobroma cacao TCM_025913 I 0.705
TCM_040015 Theobroma cacao TCM_040015 I 0.705
30084.m000185 Ricinus communis 30084.m000185 I 0.705
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.705
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.705
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.704
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.704
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.703
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.703
Cla021590 Citrullus lanatus Cla021590 I 0.703
Ca_00417 Cicer arietinum Ca_00417 I 0.701
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.699
OB09G23520 Oryza brachyantha OB09G23520 I 0.697
Pm000004 Prunus mume Pm000004 I 0.694
F775_04303 Aegilops tauschii F775_04303 I 0.694
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.694
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.694
MDP0000525933 Malus domestica MDP0000525933 I 0.694
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.693
Cla012318 Citrullus lanatus Cla012318 I 0.692
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.692
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.692
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.692
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.692
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.692
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.691
Cla019296 Citrullus lanatus Cla019296 N 0.691
Cucsa.198700 Cucumis sativus Cucsa.198700 N 0.691
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.690
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.690
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.689
mgf023693m Mimulus guttatus mgf023693m I 0.687
mgf022810m Mimulus guttatus mgf022810m I 0.687
TCM_015579 Theobroma cacao TCM_015579 I 0.686
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.686
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.686
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.686
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.685
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.685
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.685
30068.m002623 Ricinus communis 30068.m002623 I 0.680
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.679
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.678