MDP0000163645 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000163645 T008987_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.815 0.879
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.805 0.899
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.803 0.889
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.782 0.828
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000163645 AP2 136 186
MDP0000163645 AP2 228 279

Links

Other AP2 family TFs
Other Malus domestica TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.839
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.839
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.835
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.835
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.826
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.826
Pm002492 Prunus mume Pm002492 I 0.826
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.825
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.823
MDP0000200319 Malus domestica MDP0000200319 I 0.823
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.823
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.823
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.823
TCM_022077 Theobroma cacao TCM_022077 I 0.823
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.823
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.823
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.822
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.822
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.822
28752.m000339 Ricinus communis 28752.m000339 I 0.822
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.822
Si025305m.g Setaria italica Si025305m.g I 0.822
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.822
OS05G0121600 Oryza sativa OS05G0121600 I 0.822
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.822
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.822
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.822
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.822
Ca_02499 Cicer arietinum Ca_02499 I 0.822
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.822
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.822
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.822
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.822
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.822
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.822
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.822
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.822
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.822
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.822
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.821
PK07183.1 Cannabis sativa PK07183.1 I 0.821
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.819
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.819
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.819
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.818
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.818
Pm000974 Prunus mume Pm000974 I 0.818
MDP0000181606 Malus domestica MDP0000181606 I 0.818
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.818
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.817
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.817
TCM_042000 Theobroma cacao TCM_042000 I 0.817
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.817
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.817
Cla018124 Citrullus lanatus Cla018124 I 0.817
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.817
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.817
29805.m001494 Ricinus communis 29805.m001494 I 0.817
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.817
F775_32962 Aegilops tauschii F775_32962 I 0.817
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.817
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.817
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.817
TCM_000665 Theobroma cacao TCM_000665 I 0.816
Cla000716 Citrullus lanatus Cla000716 I 0.816
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.816
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.816
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.816
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.816
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.816
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.816
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.816
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.816
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.816
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.816
PK02403.1 Cannabis sativa PK02403.1 I 0.816
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.816
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.816
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.816
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.816
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.816
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.816
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.815
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.815
AP2 Arabidopsis thaliana AT4G36920 I 0.815
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.815
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.815
mgf009315m Mimulus guttatus mgf009315m I 0.815
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.815
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.815
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.815
Bo1g004960 Brassica oleracea Bo1g004960 I 0.815
Bra017809 Brassica rapa Bra017809 I 0.815
Ca_09295 Cicer arietinum Ca_09295 I 0.815
Bo7g118400 Brassica oleracea Bo7g118400 I 0.815
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.815
Bra011741 Brassica rapa Bra011741 I 0.815
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.815
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.814
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.814
mgf021945m Mimulus guttatus mgf021945m I 0.814
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.813
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.811
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.810
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.809
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.809
Si012635m.g Setaria italica Si012635m.g I 0.809
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.809
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.809
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.809
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.809
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.809
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.809
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.809
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.809
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.808
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.808
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.808
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.807
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.807
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.807
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.807
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.807
OB06G29960 Oryza brachyantha OB06G29960 I 0.807
29169.m000017 Ricinus communis 29169.m000017 I 0.806
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.806
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.806
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.806
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.805
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.805
Ca_12010 Cicer arietinum Ca_12010 I 0.805
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.805
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.805
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.805
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.805
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.805
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.805
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.805
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.805
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.804
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.804
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.804
OBART07G08110 Oryza barthii OBART07G08110 I 0.804
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.804
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.804
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.804
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.804
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.804
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.804
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.804
OS07G0235800 Oryza sativa OS07G0235800 I 0.804
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.804
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.804
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.804
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.804
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.803
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.803
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.803
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.802
OB03G45870 Oryza brachyantha OB03G45870 I 0.802
Bo4g070350 Brassica oleracea Bo4g070350 I 0.802
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.802
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.802
Bra011939 Brassica rapa Bra011939 I 0.802
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.801
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.800
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.800
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.800
Si036068m.g Setaria italica Si036068m.g I 0.800
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.800
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.800
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.800
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.800
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.800
Pm030172 Prunus mume Pm030172 I 0.800
Si029636m.g Setaria italica Si029636m.g I 0.800
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.800
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.800
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.800
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.799
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.799
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.799
MDP0000137561 Malus domestica MDP0000137561 I 0.799
Ca_14618 Cicer arietinum Ca_14618 I 0.798
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.798
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.797
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.797
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.797
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.797
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.797
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.797
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.796
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.796
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.796
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.795
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.794
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.792
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.791
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.791
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.784
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.784
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.784
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.783
P93632_MAIZE Zea mays P93632_MAIZE D 0.782
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.782
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.782
mgf005133m Mimulus guttatus mgf005133m I 0.781
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.781
mgf010466m Mimulus guttatus mgf010466m I 0.781
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.781
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.779
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.779
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.779
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.778
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.778
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.777
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.777
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.776
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.775
TOE3 Arabidopsis thaliana AT5G67180 I 0.775
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.775
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.775
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.775
Cla018549 Citrullus lanatus Cla018549 I 0.774
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.774
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.773
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.768
Bra012139 Brassica rapa Bra012139 I 0.768
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.768
Bo7g064000 Brassica oleracea Bo7g064000 I 0.768
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.766
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.766
Cla020549 Citrullus lanatus Cla020549 I 0.764
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.763
OS03G0818800 Oryza sativa OS03G0818800 I 0.755
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.696
Si006371m.g Setaria italica Si006371m.g I 0.687
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.679