MDP0000189347 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000189347 T009013_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.730 0.898
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.727 0.939
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.727 0.939
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000189347 AP2 62 112

Links

Other AP2 family TFs
Other Malus domestica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000262710 Malus domestica MDP0000262710 I 0.732
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.730
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.727
ERF027 Arabidopsis thaliana AT1G12630 D 0.727
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.727
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.724
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.724
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.722
TCM_016176 Theobroma cacao TCM_016176 I 0.721
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.721
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.721
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.720
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.719
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.718
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.718
Cla011673 Citrullus lanatus Cla011673 I 0.716
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.711
30147.m014311 Ricinus communis 30147.m014311 I 0.710
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.704
Bra027615 Brassica rapa Bra027615 I 0.704
Bra027616 Brassica rapa Bra027616 I 0.704
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.704
Bo9g036590 Brassica oleracea Bo9g036590 I 0.701
Cla004491 Citrullus lanatus Cla004491 I 0.696
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.692
Bo8g064940 Brassica oleracea Bo8g064940 I 0.691
Bra016761 Brassica rapa Bra016761 I 0.691
Bo9g028820 Brassica oleracea Bo9g028820 I 0.688
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.682
SapurV1A.0282s0060 Salix purpurea SapurV1A.0282s0060 N 0.681
POPTR_0001s08740 Populus trichocarpa POPTR_0001s08740 N 0.680
GLYMA10G38420 Glycine max GLYMA10G38420 I 0.678