MDP0000223609 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000223609 T009031_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.691 0.878
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.691 0.878
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.691 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000223609 AP2 45 96

Links

Other AP2 family TFs
Other Malus domestica TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30170.m014115 Ricinus communis 30170.m014115 I 0.703
DREB2D Arabidopsis thaliana AT1G75490 D 0.691
Bo2g083920 Brassica oleracea Bo2g083920 I 0.696
Bo6g086320 Brassica oleracea Bo6g086320 I 0.678
Bo6g119660 Brassica oleracea Bo6g119660 I 0.691
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.691
Bra003752 Brassica rapa Bra003752 I 0.678
Bra008200 Brassica rapa Bra008200 I 0.696
Bra015840 Brassica rapa Bra015840 I 0.691
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.691
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.691
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.703
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.701
Ca_10770 Cicer arietinum Ca_10770 I 0.697
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.703
Cla021113 Citrullus lanatus Cla021113 I 0.707
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.710
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.705
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.691
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.700
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.697
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.697
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.697
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.697
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.708
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.708
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.693
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.697
MDP0000141335 Malus domestica MDP0000141335 I 0.692
MDP0000250924 Malus domestica MDP0000250924 I 0.721
MDP0000250927 Malus domestica MDP0000250927 I 0.686
MDP0000295902 Malus domestica MDP0000295902 I 0.692
mgf024545m Mimulus guttatus mgf024545m I 0.701
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.697
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.703
Pm006274 Prunus mume Pm006274 I 0.710
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.705
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.699
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.703
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.692
TCM_034132 Theobroma cacao TCM_034132 I 0.698
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.691
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.713