MDP0000229036 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000229036 T009036_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.740 0.882
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.740 0.882
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.740 0.882
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.737 0.765
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.737 0.765
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.737 0.765
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.737 0.765
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.731 0.765
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.731 0.765
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.677 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000229036 AP2 189 240

Links

Other AP2 family TFs
Other Malus domestica TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000226099 Malus domestica MDP0000226099 I 0.813
MDP0000186131 Malus domestica MDP0000186131 I 0.813
PRUPE_ppa006595mg Prunus persica PRUPE_ppa006595mg I 0.807
Pm028829 Prunus mume Pm028829 I 0.807
Gorai.008G100500 Gossypium raimondii Gorai.008G100500 I 0.792
MTR_3g095190 Medicago truncatula MTR_3g095190 I 0.792
Ca_04147 Cicer arietinum Ca_04147 I 0.792
GLYMA04G39510 Glycine max GLYMA04G39510 I 0.787
chr1.CM0032.40.nd Lotus japonicus chr1.CM0032.40.nd I 0.784
SapurV1A.0787s0040 Salix purpurea SapurV1A.0787s0040 I 0.782
gene21091-v1.0-hybrid Fragaria vesca gene21091-v1.0-hybrid I 0.781
cassava14079.valid.m1 Manihot esculenta cassava14079.valid.m1 I 0.777
27965.m000108 Ricinus communis 27965.m000108 I 0.777
POPTR_0005s08940 Populus trichocarpa POPTR_0005s08940 I 0.774
cassava21882.m1 Manihot esculenta cassava21882.m1 I 0.771
cassava19043.valid.m1 Manihot esculenta cassava19043.valid.m1 I 0.768
cassava19042.valid.m1 Manihot esculenta cassava19042.valid.m1 I 0.768
gene27604-v1.0-hybrid Fragaria vesca gene27604-v1.0-hybrid I 0.768
MTR_1g098460 Medicago truncatula MTR_1g098460 I 0.768
ORUFI05G19030 Oryza rufipogon ORUFI05G19030 I 0.762
BRADI2G24170 Brachypodium distachyon BRADI2G24170 I 0.762
GRMZM2G100727 Zea mays GRMZM2G100727 I 0.762
OS01G0868000 Oryza sativa OS01G0868000 I 0.762
OS05G0437100 Oryza sativa OS05G0437100 I 0.762
BGIOSGA000428 Oryza indica BGIOSGA000428 I 0.762
POPTR_0005s21690 Populus trichocarpa POPTR_0005s21690 I 0.762
MLOC_7891 Hordeum vulgare MLOC_7891 I 0.762
ORGLA05G0154400 Oryza glaberrima ORGLA05G0154400 I 0.762
Pavir.Ea03713 Panicum virgatum Pavir.Ea03713 I 0.762
OGLUM01G42800 Oryza glumaepatula OGLUM01G42800 I 0.762
Pavir.J03755 Panicum virgatum Pavir.J03755 I 0.762
LPERR01G33110 Leersia perrieri LPERR01G33110 I 0.762
BGIOSGA019928 Oryza indica BGIOSGA019928 I 0.762
GRMZM2G149756 Zea mays GRMZM2G149756 I 0.762
OMERI01G35460 Oryza meridionalis OMERI01G35460 I 0.762
ORGLA01G0324200 Oryza glaberrima ORGLA01G0324200 I 0.762
ONIVA01G43260 Oryza nivara ONIVA01G43260 I 0.762
ORUFI01G41960 Oryza rufipogon ORUFI01G41960 I 0.762
ONIVA05G18720 Oryza nivara ONIVA05G18720 I 0.762
Si002010m.g Setaria italica Si002010m.g I 0.762
evm.TU.supercontig_72.47 Carica papaya evm.TU.supercontig_72.47 I 0.761
SapurV1A.0327s0220 Salix purpurea SapurV1A.0327s0220 I 0.760
GLYMA20G30835 Glycine max GLYMA20G30835 I 0.758
cassava12737.valid.m1 Manihot esculenta cassava12737.valid.m1 I 0.758
Gorai.005G078100 Gossypium raimondii Gorai.005G078100 I 0.758
evm.TU.supercontig_49.94 Carica papaya evm.TU.supercontig_49.94 I 0.758
Eucgr.F04203 Eucalyptus grandis Eucgr.F04203 I 0.758
Gorai.010G131500 Gossypium raimondii Gorai.010G131500 I 0.758
MDP0000235028 Malus domestica MDP0000235028 I 0.758
SapurV1A.0134s0150 Salix purpurea SapurV1A.0134s0150 I 0.758
orange1.1g013225m.g Citrus sinensis orange1.1g013225m.g I 0.758
MDP0000242979 Malus domestica MDP0000242979 I 0.758
Ciclev10001138m.g Citrus clementina Ciclev10001138m.g I 0.758
Carubv10028647m.g Capsella rubella Carubv10028647m.g I 0.758
Cla014021 Citrullus lanatus Cla014021 I 0.758
ERF110 Vitis vinifera VIT_18s0072g00260 I 0.758
Pm022509 Prunus mume Pm022509 I 0.758
29863.m001066 Ricinus communis 29863.m001066 I 0.758
GLYMA10G36760 Glycine max GLYMA10G36760 I 0.758
Cucsa.363830 Cucumis sativus Cucsa.363830 I 0.758
mgf000075m Mimulus guttatus mgf000075m I 0.755
Ca_04370 Cicer arietinum Ca_04370 I 0.755
Ca_18387 Cicer arietinum Ca_18387 I 0.755
PGSC0003DMG400006369 Solanum tuberosum PGSC0003DMG400006369 I 0.753
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.753
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.753
POPTR_0002s06620 Populus trichocarpa POPTR_0002s06620 I 0.753
TCM_035671 Theobroma cacao TCM_035671 I 0.753
Solyc04g071770.2 Solanum lycopersicum Solyc04g071770.2 I 0.753
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.753
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.753
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.753
chr5.CM0052.240.nd Lotus japonicus chr5.CM0052.240.nd I 0.753
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.750
chr2.LjT11L13.40.nc Lotus japonicus chr2.LjT11L13.40.nc I 0.748
Eucgr.F02691 Eucalyptus grandis Eucgr.F02691 I 0.748
Solyc12g056590.1 Solanum lycopersicum Solyc12g056590.1 I 0.748
GLYMA16G27950 Glycine max GLYMA16G27950 I 0.748
PGSC0003DMG400018803 Solanum tuberosum PGSC0003DMG400018803 I 0.748
GLYMA02G08835 Glycine max GLYMA02G08835 I 0.748
Ca_19135 Cicer arietinum Ca_19135 I 0.747
OPUNC11G03940 Oryza punctata OPUNC11G03940 I 0.747
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.746
Cagra.3842s0001 Capsella grandiflora Cagra.3842s0001 I 0.745
Carubv10010478m.g Capsella rubella Carubv10010478m.g I 0.745
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.745
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.744
Cucsa.365850 Cucumis sativus Cucsa.365850 I 0.744
Cla003851 Citrullus lanatus Cla003851 I 0.744
Bra037794 Brassica rapa Bra037794 I 0.744
MDP0000894895 Malus domestica MDP0000894895 I 0.744
Pavir.Cb02005 Panicum virgatum Pavir.Cb02005 I 0.743
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.743
TCM_014762 Theobroma cacao TCM_014762 I 0.743
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.743
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.743
ORUFI11G04200 Oryza rufipogon ORUFI11G04200 I 0.743
Pavir.J04335 Panicum virgatum Pavir.J04335 I 0.743
ONIVA11G04340 Oryza nivara ONIVA11G04340 I 0.743
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.743
OGLUM11G04050 Oryza glumaepatula OGLUM11G04050 I 0.743
BGIOSGA034432 Oryza indica BGIOSGA034432 I 0.743
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.743
Ca_01387 Cicer arietinum Ca_01387 I 0.743
OS11G0168500 Oryza sativa OS11G0168500 I 0.743
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.743
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.743
ORGLA11G0040400 Oryza glaberrima ORGLA11G0040400 I 0.743
MTR_6g037610 Medicago truncatula MTR_6g037610 I 0.742
BRADI2G56140 Brachypodium distachyon BRADI2G56140 I 0.742
LPERR12G03800 Leersia perrieri LPERR12G03800 I 0.742
Bra024325 Brassica rapa Bra024325 I 0.740
Bra031903 Brassica rapa Bra031903 I 0.740
Carubv10026540m.g Capsella rubella Carubv10026540m.g I 0.740
Cagra.2438s0028 Capsella grandiflora Cagra.2438s0028 I 0.740
Bo3g004290 Brassica oleracea Bo3g004290 I 0.740
Thhalv10004333m.g Eutrema salsugineum Thhalv10004333m.g I 0.740
Bo2g166380 Brassica oleracea Bo2g166380 I 0.740
ABR1 Arabidopsis thaliana AT5G64750 D 0.740
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.740
Bostr.0568s0320 Boechera stricta Bostr.0568s0320 I 0.740
ABR1 Arabidopsis lyrata fgenesh2_kg.8__2506__AT5G64750.1 I 0.740
Bostr.7200s0089 Boechera stricta Bostr.7200s0089 I 0.740
Bo3g100930 Brassica oleracea Bo3g100930 I 0.740
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.739
Gorai.011G114900 Gossypium raimondii Gorai.011G114900 I 0.738
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.738
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.738
RAP2-6 Arabidopsis thaliana AT1G43160 D 0.737
mgf019280m Mimulus guttatus mgf019280m I 0.737
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.736
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.736
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.735
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.735
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.735
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.735
Bo9g175390 Brassica oleracea Bo9g175390 I 0.735
Pavir.Ha01720 Panicum virgatum Pavir.Ha01720 I 0.735
Pavir.Hb01784 Panicum virgatum Pavir.Hb01784 I 0.735
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.735
Bra009272 Brassica rapa Bra009272 I 0.735
Si026709m.g Setaria italica Si026709m.g I 0.735
Bo2g008570 Brassica oleracea Bo2g008570 I 0.734
Pm024604 Prunus mume Pm024604 I 0.734
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.733
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.733
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.733
30147.m014403 Ricinus communis 30147.m014403 I 0.733
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.733
GSMUA_Achr6G25680_001 Musa acuminata GSMUA_Achr6G25680_001 I 0.733
ERF110 Arabidopsis thaliana AT5G50080 I 0.732
Cla019618 Citrullus lanatus Cla019618 I 0.732
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.732
ERF110 Arabidopsis lyrata fgenesh2_kg.8__881__AT5G50080.1 I 0.732
TCM_001301 Theobroma cacao TCM_001301 I 0.732
Bra005932 Brassica rapa Bra005932 I 0.732
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.731
ERF115 Arabidopsis thaliana AT5G07310 D 0.731
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.730
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.730
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.729
Pavir.J17038 Panicum virgatum Pavir.J17038 I 0.728
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.726
Cla007205 Citrullus lanatus Cla007205 I 0.726
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.726
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.726
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.726
Gorai.003G048800 Gossypium raimondii Gorai.003G048800 I 0.725
Cucsa.250290 Cucumis sativus Cucsa.250290 I 0.725
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.725
LjT03L06.60.nd Lotus japonicus LjT03L06.60.nd I 0.724
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.723
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.723
GLYMA06G15341 Glycine max GLYMA06G15341 I 0.722
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.722
MTR_8g092460 Medicago truncatula MTR_8g092460 I 0.721
GLYMA05G32040 Glycine max GLYMA05G32040 I 0.721
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.720
TCM_017352 Theobroma cacao TCM_017352 I 0.720
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.720
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.720
Bostr.12302s0024 Boechera stricta Bostr.12302s0024 I 0.720
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.720
30131.m006971 Ricinus communis 30131.m006971 I 0.719
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.719
Solyc03g118190.2 Solanum lycopersicum Solyc03g118190.2 I 0.719
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.719
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.719
PGSC0003DMG400014240 Solanum tuberosum PGSC0003DMG400014240 I 0.719
Bra019622 Brassica rapa Bra019622 I 0.718
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.718
POPTR_0007s07090 Populus trichocarpa POPTR_0007s07090 I 0.717
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.717
ABR1 Vitis vinifera VIT_07s0031g01980 I 0.717
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.716
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.716
Cla008608 Citrullus lanatus Cla008608 I 0.715
Ca_09638 Cicer arietinum Ca_09638 I 0.714
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.714
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.713
Cla007885 Citrullus lanatus Cla007885 I 0.712
Bra028703 Brassica rapa Bra028703 I 0.711
Bostr.15774s0146 Boechera stricta Bostr.15774s0146 I 0.711
GSMUA_Achr6G02310_001 Musa acuminata GSMUA_Achr6G02310_001 I 0.711
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.710
Ca_21773 Cicer arietinum Ca_21773 I 0.709
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.708
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.706
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.705
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.705
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.705
RRTF1 Vitis vinifera VIT_03s0063g00460 I 0.704
Bo3g109240 Brassica oleracea Bo3g109240 I 0.702
Bostr.26833s0047 Boechera stricta Bostr.26833s0047 I 0.702
scaffold_802838.1 Arabidopsis lyrata scaffold_802838.1 I 0.702
ERF114 Arabidopsis thaliana AT5G61890 I 0.702
Bo2g161710 Brassica oleracea Bo2g161710 I 0.702
Cagra.4553s0019 Capsella grandiflora Cagra.4553s0019 I 0.702
Carubv10027012m.g Capsella rubella Carubv10027012m.g I 0.702
Bra029302 Brassica rapa Bra029302 I 0.702
Thhalv10005416m.g Eutrema salsugineum Thhalv10005416m.g I 0.702
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.702
OBART02G18470 Oryza barthii OBART02G18470 I 0.701
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.700
Si018024m.g Setaria italica Si018024m.g I 0.699
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.698
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.698
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.698
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.698
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.698
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.698
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.698
GSMUA_Achr8G08000_001 Musa acuminata GSMUA_Achr8G08000_001 I 0.697
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.696
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.695
ERF11 Arabidopsis lyrata fgenesh2_kg.1__3005__AT1G28370.1 I 0.693
MDP0000668122 Malus domestica MDP0000668122 I 0.693
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.693
Eucgr.H04892 Eucalyptus grandis Eucgr.H04892 I 0.693
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.692
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.692
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.690
orange1.1g020801m.g Citrus sinensis orange1.1g020801m.g I 0.689
Ciclev10026052m.g Citrus clementina Ciclev10026052m.g I 0.689
Aquca_013_00161 Aquilegia coerulea Aquca_013_00161 I 0.687
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.685
GLYMA05G33440 Glycine max GLYMA05G33440 I 0.682
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.681
chr1.LjT14I13.10.nd Lotus japonicus chr1.LjT14I13.10.nd I 0.680
mgf021642m Mimulus guttatus mgf021642m I 0.679
cassava40570.m1 Manihot esculenta cassava40570.m1 I 0.679
e_gw1.117.76.1 Physcomitrella patens e_gw1.117.76.1 I 0.679
cassava8409.m1 Manihot esculenta cassava8409.m1 I 0.679
Solyc04g012050.2 Solanum lycopersicum Solyc04g012050.2 I 0.678
PGSC0003DMG400023593 Solanum tuberosum PGSC0003DMG400023593 I 0.678
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.678
ERF113 Arabidopsis thaliana AT5G13330 D 0.677
Rap2.6L Arabidopsis lyrata fgenesh2_kg.6__1285__AT5G13330.1 I 0.677
Bostr.2902s0068 Boechera stricta Bostr.2902s0068 I 0.677
Carubv10001831m.g Capsella rubella Carubv10001831m.g I 0.677
Bra030095 Brassica rapa Bra030095 I 0.677
Bo7g048170 Brassica oleracea Bo7g048170 I 0.677
Thhalv10014575m.g Eutrema salsugineum Thhalv10014575m.g I 0.677