MDP0000229036 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000229036 T009036_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABR1
M01051_2.00
Arabidopsis thaliana
NYGSCGSCVNN

NNBGSCGSCRN
PBM
Sullivan et al.(2014)
pTH7383
0.740 0.882
ABR1
M06684_2.00
Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH

DDNDRNDDHKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ABR1_col_a
0.740 0.882
ABR1
M06685_2.00
Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN

NNNNNDWTKGCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ABR1_colamp_a
0.740 0.882
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.737 0.765
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.737 0.765
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.737 0.765
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.737 0.765
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.731 0.765
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.731 0.765
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.677 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000229036 AP2 189 240

Links

Other AP2 family TFs
Other Malus domestica TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27965.m000108 Ricinus communis 27965.m000108 I 0.777
29863.m001066 Ricinus communis 29863.m001066 I 0.758
30131.m006971 Ricinus communis 30131.m006971 I 0.719
30147.m014403 Ricinus communis 30147.m014403 I 0.733
ABR1 Arabidopsis thaliana AT5G64750 D 0.740
ABR1 Arabidopsis lyrata fgenesh2_kg.8__2506__AT5G64750.1 I 0.740
ABR1 Vitis vinifera VIT_07s0031g01980 I 0.717
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.718
Aquca_013_00161 Aquilegia coerulea Aquca_013_00161 I 0.687
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.719
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.726
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.681
BGIOSGA000428 Oryza indica BGIOSGA000428 I 0.762
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.698
BGIOSGA019928 Oryza indica BGIOSGA019928 I 0.762
BGIOSGA034432 Oryza indica BGIOSGA034432 I 0.743
Bo2g008570 Brassica oleracea Bo2g008570 I 0.734
Bo2g161710 Brassica oleracea Bo2g161710 I 0.702
Bo2g166380 Brassica oleracea Bo2g166380 I 0.740
Bo3g004290 Brassica oleracea Bo3g004290 I 0.740
Bo3g100930 Brassica oleracea Bo3g100930 I 0.740
Bo3g109240 Brassica oleracea Bo3g109240 I 0.702
Bo7g048170 Brassica oleracea Bo7g048170 I 0.677
Bo9g175390 Brassica oleracea Bo9g175390 I 0.735
Bostr.0568s0320 Boechera stricta Bostr.0568s0320 I 0.740
Bostr.12302s0024 Boechera stricta Bostr.12302s0024 I 0.720
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.735
Bostr.15774s0146 Boechera stricta Bostr.15774s0146 I 0.711
Bostr.26833s0047 Boechera stricta Bostr.26833s0047 I 0.702
Bostr.2902s0068 Boechera stricta Bostr.2902s0068 I 0.677
Bostr.7200s0089 Boechera stricta Bostr.7200s0089 I 0.740
Bra005932 Brassica rapa Bra005932 I 0.732
Bra009272 Brassica rapa Bra009272 I 0.735
Bra019622 Brassica rapa Bra019622 I 0.718
Bra024325 Brassica rapa Bra024325 I 0.740
Bra028703 Brassica rapa Bra028703 I 0.711
Bra029302 Brassica rapa Bra029302 I 0.702
Bra030095 Brassica rapa Bra030095 I 0.677
Bra031903 Brassica rapa Bra031903 I 0.740
Bra037794 Brassica rapa Bra037794 I 0.744
BRADI2G24170 Brachypodium distachyon BRADI2G24170 I 0.762
BRADI2G56140 Brachypodium distachyon BRADI2G56140 I 0.742
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.753
Cagra.2438s0028 Capsella grandiflora Cagra.2438s0028 I 0.740
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.735
Cagra.3842s0001 Capsella grandiflora Cagra.3842s0001 I 0.745
Cagra.4553s0019 Capsella grandiflora Cagra.4553s0019 I 0.702
Carubv10001831m.g Capsella rubella Carubv10001831m.g I 0.677
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.735
Carubv10010478m.g Capsella rubella Carubv10010478m.g I 0.745
Carubv10026540m.g Capsella rubella Carubv10026540m.g I 0.740
Carubv10027012m.g Capsella rubella Carubv10027012m.g I 0.702
Carubv10028647m.g Capsella rubella Carubv10028647m.g I 0.758
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.726
cassava12737.valid.m1 Manihot esculenta cassava12737.valid.m1 I 0.758
cassava14079.valid.m1 Manihot esculenta cassava14079.valid.m1 I 0.777
cassava19042.valid.m1 Manihot esculenta cassava19042.valid.m1 I 0.768
cassava19043.valid.m1 Manihot esculenta cassava19043.valid.m1 I 0.768
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.743
cassava21882.m1 Manihot esculenta cassava21882.m1 I 0.771
cassava40570.m1 Manihot esculenta cassava40570.m1 I 0.679
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.719
cassava8409.m1 Manihot esculenta cassava8409.m1 I 0.679
Ca_01387 Cicer arietinum Ca_01387 I 0.743
Ca_04147 Cicer arietinum Ca_04147 I 0.792
Ca_04370 Cicer arietinum Ca_04370 I 0.755
Ca_09638 Cicer arietinum Ca_09638 I 0.714
Ca_18387 Cicer arietinum Ca_18387 I 0.755
Ca_19135 Cicer arietinum Ca_19135 I 0.747
Ca_21773 Cicer arietinum Ca_21773 I 0.709
chr1.CM0032.40.nd Lotus japonicus chr1.CM0032.40.nd I 0.784
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.743
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.719
chr1.LjT14I13.10.nd Lotus japonicus chr1.LjT14I13.10.nd I 0.680
chr2.LjT11L13.40.nc Lotus japonicus chr2.LjT11L13.40.nc I 0.748
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.722
chr5.CM0052.240.nd Lotus japonicus chr5.CM0052.240.nd I 0.753
Ciclev10001138m.g Citrus clementina Ciclev10001138m.g I 0.758
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.730
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.738
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.716
Ciclev10026052m.g Citrus clementina Ciclev10026052m.g I 0.689
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.733
Cla003851 Citrullus lanatus Cla003851 I 0.744
Cla007205 Citrullus lanatus Cla007205 I 0.726
Cla007885 Citrullus lanatus Cla007885 I 0.712
Cla008608 Citrullus lanatus Cla008608 I 0.715
Cla014021 Citrullus lanatus Cla014021 I 0.758
Cla019618 Citrullus lanatus Cla019618 I 0.732
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.710
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.732
Cucsa.250290 Cucumis sativus Cucsa.250290 I 0.725
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.726
Cucsa.363830 Cucumis sativus Cucsa.363830 I 0.758
Cucsa.365850 Cucumis sativus Cucsa.365850 I 0.744
ERF11 Arabidopsis lyrata fgenesh2_kg.1__3005__AT1G28370.1 I 0.693
ERF110 Arabidopsis thaliana AT5G50080 I 0.732
ERF110 Vitis vinifera VIT_18s0072g00260 I 0.758
ERF110 Arabidopsis lyrata fgenesh2_kg.8__881__AT5G50080.1 I 0.732
ERF113 Arabidopsis thaliana AT5G13330 D 0.677
ERF114 Arabidopsis thaliana AT5G61890 I 0.702
ERF115 Arabidopsis thaliana AT5G07310 D 0.731
Eucgr.F02691 Eucalyptus grandis Eucgr.F02691 I 0.748
Eucgr.F04203 Eucalyptus grandis Eucgr.F04203 I 0.758
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.700
Eucgr.H04892 Eucalyptus grandis Eucgr.H04892 I 0.693
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.695
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.692
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.692
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.731
evm.TU.supercontig_49.94 Carica papaya evm.TU.supercontig_49.94 I 0.758
evm.TU.supercontig_72.47 Carica papaya evm.TU.supercontig_72.47 I 0.761
e_gw1.117.76.1 Physcomitrella patens e_gw1.117.76.1 I 0.679
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.735
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.713
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.743
gene21091-v1.0-hybrid Fragaria vesca gene21091-v1.0-hybrid I 0.781
gene27604-v1.0-hybrid Fragaria vesca gene27604-v1.0-hybrid I 0.768
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.733
GLYMA02G08835 Glycine max GLYMA02G08835 I 0.748
GLYMA04G39510 Glycine max GLYMA04G39510 I 0.787
GLYMA05G32040 Glycine max GLYMA05G32040 I 0.721
GLYMA05G33440 Glycine max GLYMA05G33440 I 0.682
GLYMA06G15341 Glycine max GLYMA06G15341 I 0.722
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.743
GLYMA10G36760 Glycine max GLYMA10G36760 I 0.758
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.720
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.733
GLYMA16G27950 Glycine max GLYMA16G27950 I 0.748
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.720
GLYMA20G30835 Glycine max GLYMA20G30835 I 0.758
Gorai.003G048800 Gossypium raimondii Gorai.003G048800 I 0.725
Gorai.005G078100 Gossypium raimondii Gorai.005G078100 I 0.758
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.720
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.717
Gorai.008G100500 Gossypium raimondii Gorai.008G100500 I 0.792
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.739
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.745
Gorai.010G131500 Gossypium raimondii Gorai.010G131500 I 0.758
Gorai.011G114900 Gossypium raimondii Gorai.011G114900 I 0.738
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.690
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.744
GRMZM2G100727 Zea mays GRMZM2G100727 I 0.762
GRMZM2G149756 Zea mays GRMZM2G149756 I 0.762
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.753
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.729
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.726
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.685
GSMUA_Achr6G02310_001 Musa acuminata GSMUA_Achr6G02310_001 I 0.711
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.723
GSMUA_Achr6G25680_001 Musa acuminata GSMUA_Achr6G25680_001 I 0.733
GSMUA_Achr8G08000_001 Musa acuminata GSMUA_Achr8G08000_001 I 0.697
LjT03L06.60.nd Lotus japonicus LjT03L06.60.nd I 0.724
LPERR01G33110 Leersia perrieri LPERR01G33110 I 0.762
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.702
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.753
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.706
LPERR12G03800 Leersia perrieri LPERR12G03800 I 0.742
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.698
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.698
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.740
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.753
MDP0000186131 Malus domestica MDP0000186131 I 0.813
MDP0000226099 Malus domestica MDP0000226099 I 0.813
MDP0000235028 Malus domestica MDP0000235028 I 0.758
MDP0000242979 Malus domestica MDP0000242979 I 0.758
MDP0000668122 Malus domestica MDP0000668122 I 0.693
MDP0000894895 Malus domestica MDP0000894895 I 0.744
mgf000075m Mimulus guttatus mgf000075m I 0.755
mgf019280m Mimulus guttatus mgf019280m I 0.737
mgf021642m Mimulus guttatus mgf021642m I 0.679
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.705
MLOC_7891 Hordeum vulgare MLOC_7891 I 0.762
MTR_1g098460 Medicago truncatula MTR_1g098460 I 0.768
MTR_3g095190 Medicago truncatula MTR_3g095190 I 0.792
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.743
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.725
MTR_6g037610 Medicago truncatula MTR_6g037610 I 0.742
MTR_8g092460 Medicago truncatula MTR_8g092460 I 0.721
OBART02G18470 Oryza barthii OBART02G18470 I 0.701
OGLUM01G42800 Oryza glumaepatula OGLUM01G42800 I 0.762
OGLUM11G04050 Oryza glumaepatula OGLUM11G04050 I 0.743
OMERI01G35460 Oryza meridionalis OMERI01G35460 I 0.762
ONIVA01G43260 Oryza nivara ONIVA01G43260 I 0.762
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.698
ONIVA05G18720 Oryza nivara ONIVA05G18720 I 0.762
ONIVA11G04340 Oryza nivara ONIVA11G04340 I 0.743
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.698
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.753
OPUNC11G03940 Oryza punctata OPUNC11G03940 I 0.747
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.730
orange1.1g013225m.g Citrus sinensis orange1.1g013225m.g I 0.758
orange1.1g020801m.g Citrus sinensis orange1.1g020801m.g I 0.689
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.733
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.716
ORGLA01G0324200 Oryza glaberrima ORGLA01G0324200 I 0.762
ORGLA05G0154400 Oryza glaberrima ORGLA05G0154400 I 0.762
ORGLA11G0040400 Oryza glaberrima ORGLA11G0040400 I 0.743
ORUFI01G41960 Oryza rufipogon ORUFI01G41960 I 0.762
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.698
ORUFI05G19030 Oryza rufipogon ORUFI05G19030 I 0.762
ORUFI11G04200 Oryza rufipogon ORUFI11G04200 I 0.743
OS01G0868000 Oryza sativa OS01G0868000 I 0.762
OS05G0437100 Oryza sativa OS05G0437100 I 0.762
OS11G0168500 Oryza sativa OS11G0168500 I 0.743
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.696
Pavir.Cb02005 Panicum virgatum Pavir.Cb02005 I 0.743
Pavir.Ea03713 Panicum virgatum Pavir.Ea03713 I 0.762
Pavir.Ha01720 Panicum virgatum Pavir.Ha01720 I 0.735
Pavir.Hb01784 Panicum virgatum Pavir.Hb01784 I 0.735
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.736
Pavir.J03755 Panicum virgatum Pavir.J03755 I 0.762
Pavir.J04335 Panicum virgatum Pavir.J04335 I 0.743
Pavir.J17038 Panicum virgatum Pavir.J17038 I 0.728
PGSC0003DMG400006369 Solanum tuberosum PGSC0003DMG400006369 I 0.753
PGSC0003DMG400014240 Solanum tuberosum PGSC0003DMG400014240 I 0.719
PGSC0003DMG400018803 Solanum tuberosum PGSC0003DMG400018803 I 0.748
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.708
PGSC0003DMG400023593 Solanum tuberosum PGSC0003DMG400023593 I 0.678
Pm022509 Prunus mume Pm022509 I 0.758
Pm024604 Prunus mume Pm024604 I 0.734
Pm028829 Prunus mume Pm028829 I 0.807
POPTR_0002s06620 Populus trichocarpa POPTR_0002s06620 I 0.753
POPTR_0005s08940 Populus trichocarpa POPTR_0005s08940 I 0.774
POPTR_0005s21690 Populus trichocarpa POPTR_0005s21690 I 0.762
POPTR_0007s07090 Populus trichocarpa POPTR_0007s07090 I 0.717
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.743
PRUPE_ppa006595mg Prunus persica PRUPE_ppa006595mg I 0.807
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.736
RAP2-6 Arabidopsis thaliana AT1G43160 D 0.737
Rap2.6L Arabidopsis lyrata fgenesh2_kg.6__1285__AT5G13330.1 I 0.677
RRTF1 Vitis vinifera VIT_03s0063g00460 I 0.704
SapurV1A.0134s0150 Salix purpurea SapurV1A.0134s0150 I 0.758
SapurV1A.0327s0220 Salix purpurea SapurV1A.0327s0220 I 0.760
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.743
SapurV1A.0787s0040 Salix purpurea SapurV1A.0787s0040 I 0.782
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.720
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.723
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.698
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.746
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.678
scaffold_802838.1 Arabidopsis lyrata scaffold_802838.1 I 0.702
Si002010m.g Setaria italica Si002010m.g I 0.762
Si018024m.g Setaria italica Si018024m.g I 0.699
Si026709m.g Setaria italica Si026709m.g I 0.735
Solyc03g118190.2 Solanum lycopersicum Solyc03g118190.2 I 0.719
Solyc04g012050.2 Solanum lycopersicum Solyc04g012050.2 I 0.678
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.693
Solyc04g071770.2 Solanum lycopersicum Solyc04g071770.2 I 0.753
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.738
Solyc12g056590.1 Solanum lycopersicum Solyc12g056590.1 I 0.748
TCM_001301 Theobroma cacao TCM_001301 I 0.732
TCM_014762 Theobroma cacao TCM_014762 I 0.743
TCM_017352 Theobroma cacao TCM_017352 I 0.720
TCM_035671 Theobroma cacao TCM_035671 I 0.753
Thhalv10004333m.g Eutrema salsugineum Thhalv10004333m.g I 0.740
Thhalv10005416m.g Eutrema salsugineum Thhalv10005416m.g I 0.702
Thhalv10014575m.g Eutrema salsugineum Thhalv10014575m.g I 0.677
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.750
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.735
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.705
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.705
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.714