MDP0000250924 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000250924 T009053_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.774 0.939
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.774 0.939
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.774 0.939
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.727 0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.692 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000250924 AP2 118 169

Links

Other AP2 family TFs
Other Malus domestica TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK07402.1 Cannabis sativa PK07402.1 D 0.692
DREB2D Arabidopsis thaliana AT1G75490 D 0.774
DREB2G Arabidopsis thaliana AT5G18450 D 0.727
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.722
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.774
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.727
Cla021113 Citrullus lanatus Cla021113 I 0.791
mgf024545m Mimulus guttatus mgf024545m I 0.779
mgf017629m Mimulus guttatus mgf017629m I 0.727
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.774
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.722
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.774
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.786
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.706
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.738
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.715
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.688
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.700
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.692
Cla022803 Citrullus lanatus Cla022803 I 0.740
Pm003634 Prunus mume Pm003634 I 0.732
Pm006274 Prunus mume Pm006274 I 0.794
29680.m001737 Ricinus communis 29680.m001737 I 0.713
29729.m002292 Ricinus communis 29729.m002292 I 0.701
30170.m014115 Ricinus communis 30170.m014115 I 0.786
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.712
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.716
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.786
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.785
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.699
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.740
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.794
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.725
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.789
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.783
MDP0000250927 Malus domestica MDP0000250927 I 0.770
MDP0000295902 Malus domestica MDP0000295902 I 0.775
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.786
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.775
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.712
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.692
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.712
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.692
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.727
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.697
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.774
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.747
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.781
MDP0000223609 Malus domestica MDP0000223609 I 0.721
MDP0000153866 Malus domestica MDP0000153866 I 0.697
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.749
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.791
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.747
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.791
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.770
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.680
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.755
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.734
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.703
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.685
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.755
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.685
MDP0000141335 Malus domestica MDP0000141335 I 0.775
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.685
Cla006713 Citrullus lanatus Cla006713 I 0.698
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.682
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.781
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.781
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.780
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.780
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.697
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.697
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.694
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.708
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.695
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.723
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.685
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.781
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.727
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.774
Bra023674 Brassica rapa Bra023674 I 0.707
Bra015840 Brassica rapa Bra015840 I 0.774
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.678
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.678
Bo2g016490 Brassica oleracea Bo2g016490 I 0.707
Bo2g083920 Brassica oleracea Bo2g083920 I 0.779
Bo3g013160 Brassica oleracea Bo3g013160 I 0.684
Bo6g086320 Brassica oleracea Bo6g086320 I 0.761
Bo6g119660 Brassica oleracea Bo6g119660 I 0.774
Bo9g155940 Brassica oleracea Bo9g155940 I 0.727
Bra002159 Brassica rapa Bra002159 I 0.727
Bra003752 Brassica rapa Bra003752 I 0.761
Bra006460 Brassica rapa Bra006460 I 0.684
Bra008200 Brassica rapa Bra008200 I 0.779
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.689
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.678
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.688
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.738
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.689
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.697
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.727
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.689
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.689
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.735
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.720
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.714
TCM_026121 Theobroma cacao TCM_026121 I 0.699
TCM_034132 Theobroma cacao TCM_034132 I 0.781
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.697
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.796
Ca_10770 Cicer arietinum Ca_10770 I 0.781
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.786
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.710
OB08G30790 Oryza brachyantha OB08G30790 I 0.678
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.678
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.678
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.678
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.678
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.678
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.678
DREB2C Oryza sativa OS08G0565200 I 0.678
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.720
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.714
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.735
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.784
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.782
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.713
MDP0000293996 Malus domestica MDP0000293996 N 0.690