MDP0000262710 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000262710 T009058_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.694 0.878
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN

NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.691 0.918
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN

NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.691 0.918
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN

NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
0.682 0.878
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN

NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
0.682 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000262710 AP2 70 120

Links

Other AP2 family TFs
Other Malus domestica TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000189347 Malus domestica MDP0000189347 I 0.732
Ciclev10023840m.g Citrus clementina Ciclev10023840m.g I 0.710
orange1.1g030591m.g Citrus sinensis orange1.1g030591m.g N 0.701
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.694
ERF027 Arabidopsis thaliana AT1G12630 D 0.691
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.691
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.691
BRADI3G51610 Brachypodium distachyon BRADI3G51610 N 0.690
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.688
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.688
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.686
scaffold_801641.1 Arabidopsis lyrata scaffold_801641.1 I 0.685
TCM_016176 Theobroma cacao TCM_016176 I 0.685
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.685
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.685
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.684
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.683
ERF025 Arabidopsis thaliana AT5G52020 D 0.682
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.682
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.682
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.682
SapurV1A.0282s0060 Salix purpurea SapurV1A.0282s0060 N 0.681
Traes_6DL_FD6D63D1A Triticum aestivum Traes_6DL_FD6D63D1A N 0.681
MLOC_62554 Hordeum vulgare MLOC_62554 N 0.681
POPTR_0001s08740 Populus trichocarpa POPTR_0001s08740 N 0.680
Cla011673 Citrullus lanatus Cla011673 I 0.680