CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000281784
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000281784
T009070_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.677
0.698
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.677
0.698
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000281784
AP2
83
143
SRFRGVSRHRWTGRYEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGT
MDP0000281784
AP2
185
237
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAAHAYDIAAIEYRGI
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
329 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy