MDP0000285955 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000285955 T009073_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.820 0.938
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.812 0.938
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000285955 AP2 155 212

Links

Other AP2 family TFs
Other Malus domestica TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27613.m000642 Ricinus communis 27613.m000642 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
Ca_09786 Cicer arietinum Ca_09786 N 0.000
Ca_13855 Cicer arietinum Ca_13855 N 0.000
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.000
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.000
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.000
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.000
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.000
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.000
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.000
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.000
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.000
MDP0000205236 Malus domestica MDP0000205236 N 0.000
MDP0000284679 Malus domestica MDP0000284679 N 0.000
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.000
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.000
Pm012019 Prunus mume Pm012019 N 0.000
TCM_030733 Theobroma cacao TCM_030733 N 0.000