MDP0000285955 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000285955 T009073_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.820 0.938
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.812 0.938
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000285955 AP2 155 212

Links

Other AP2 family TFs
Other Malus domestica TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPRG_00136 Saprolegnia parasitica SPRG_00136 N 0.000
Physo142188 Phytophthora sojae Physo142188 N 0.000
Physo138014 Phytophthora sojae Physo138014 N 0.000
Phyra85808 Phytophthora ramorum Phyra85808 N 0.000
Phyra75440 Phytophthora ramorum Phyra75440 N 0.000
maker-pve_contig_642-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_642-fgenesh-gene-0.5 N 0.000
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N 0.000
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N 0.000
maker-piw_contig_10342-snap-gene-0.1 Pythium iwayamai maker-piw_contig_10342-snap-gene-0.1 N 0.000
Physo142190 Phytophthora sojae Physo142190 N 0.000
Physo142191 Phytophthora sojae Physo142191 N 0.000
fgenesh1_pg.C_scaffold_17000111 Phytophthora capsici fgenesh1_pg.C_scaffold_17000111 N 0.000
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N 0.000
PYU1_G007487 Pythium ultimum PYU1_G007487 N 0.000
PYU1_G007486 Pythium ultimum PYU1_G007486 N 0.000
PITG_20387 Phytophthora infestans PITG_20387 N 0.000
PITG_04700 Phytophthora infestans PITG_04700 N 0.000
PITG_04694 Phytophthora infestans PITG_04694 N 0.000
Physo142192 Phytophthora sojae Physo142192 N 0.000
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N 0.000
maker-pir_contig_4474-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_4474-fgenesh-gene-0.0 N 0.000
F443_15764 Phytophthora parasitica F443_15764 N 0.000
F443_08033 Phytophthora parasitica F443_08033 N 0.000
ALNC14_110220 Albugo laibachii ALNC14_110220 N 0.000
ALNC14_092860 Albugo laibachii ALNC14_092860 N 0.000
ALNC14_036480 Albugo laibachii ALNC14_036480 N 0.000
SPRG_11849 Saprolegnia parasitica SPRG_11849 N 0.000
SPRG_04538 Saprolegnia parasitica SPRG_04538 N 0.000
SPRG_03693 Saprolegnia parasitica SPRG_03693 N 0.000
F443_15765 Phytophthora parasitica F443_15765 N 0.000
F443_15766 Phytophthora parasitica F443_15766 N 0.000
maker-pir_contig_1338-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1338-fgenesh-gene-0.2 N 0.000
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N 0.000
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N 0.000
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N 0.000
fgenesh_scip_prom.46568.9529 Phytophthora kernoviae fgenesh_scip_prom.46568.9529 N 0.000
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N 0.000
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N 0.000
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N 0.000
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N 0.000