CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000286915
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000286915
T009075_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC
GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.771
0.878
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.697
0.653
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.697
0.653
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.697
0.653
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000286915
AP2
22
74
NRYRGIRKRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFGFRGH
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm020605
Prunus mume
Pm020605
I
0.812
PRUPE_ppa020642mg
Prunus persica
PRUPE_ppa020642mg
I
0.812
gene08075-v1.0-hybrid
Fragaria vesca
gene08075-v1.0-hybrid
I
0.811
Eucgr.B01541
Eucalyptus grandis
Eucgr.B01541
I
0.777
VIT_07s0005g03220
Vitis vinifera
VIT_07s0005g03220
I
0.776
cassava41639.m1
Manihot esculenta
cassava41639.m1
I
0.772
Bostr.19424s0320
Boechera stricta
Bostr.19424s0320
I
0.771
Cagra.8559s0002
Capsella grandiflora
Cagra.8559s0002
I
0.771
Carubv10015406m.g
Capsella rubella
Carubv10015406m.g
I
0.771
ERF098
Arabidopsis thaliana
AT3G23230
D
0.771
Cla015065
Citrullus lanatus
Cla015065
I
0.769
Cucsa.388540
Cucumis sativus
Cucsa.388540
I
0.769
Solyc09g066350.1
Solanum lycopersicum
Solyc09g066350.1
I
0.763
PGSC0003DMG400010309
Solanum tuberosum
PGSC0003DMG400010309
I
0.763
fgenesh2_kg.3__2538__AT3G23230.1
Arabidopsis lyrata
fgenesh2_kg.3__2538__AT3G23230.1
I
0.762
fgenesh2_kg.471__1__AT3G23230.1
Arabidopsis lyrata
fgenesh2_kg.471__1__AT3G23230.1
I
0.762
mgf026487m
Mimulus guttatus
mgf026487m
I
0.750
mgf021973m
Mimulus guttatus
mgf021973m
I
0.748
SapurV1A.0233s0380
Salix purpurea
SapurV1A.0233s0380
I
0.747
POPTR_0005s24450
Populus trichocarpa
POPTR_0005s24450
I
0.744
29584.m000235
Ricinus communis
29584.m000235
I
0.742
TCM_004061
Theobroma cacao
TCM_004061
I
0.742
cassava19171.valid.m1
Manihot esculenta
cassava19171.valid.m1
I
0.742
Gorai.001G176700
Gossypium raimondii
Gorai.001G176700
I
0.742
Bo7g040810
Brassica oleracea
Bo7g040810
I
0.738
Bra014925
Brassica rapa
Bra014925
I
0.738
GLYMA10G33070
Glycine max
GLYMA10G33070
I
0.737
Thhalv10022108m.g
Eutrema salsugineum
Thhalv10022108m.g
I
0.737
GLYMA20G34560
Glycine max
GLYMA20G34560
I
0.737
Cla021851
Citrullus lanatus
Cla021851
I
0.736
MDP0000312701
Malus domestica
MDP0000312701
I
0.736
MTR_1g074310
Medicago truncatula
MTR_1g074310
I
0.734
gene08073-v1.0-hybrid
Fragaria vesca
gene08073-v1.0-hybrid
I
0.732
GLYMA10G00990
Glycine max
GLYMA10G00990
I
0.731
evm.TU.supercontig_44.73
Carica papaya
evm.TU.supercontig_44.73
I
0.728
Bra023748
Brassica rapa
Bra023748
I
0.728
Bo1g102220
Brassica oleracea
Bo1g102220
I
0.728
Gorai.001G252700
Gossypium raimondii
Gorai.001G252700
I
0.726
Gorai.001G252900
Gossypium raimondii
Gorai.001G252900
I
0.726
Ca_12080
Cicer arietinum
Ca_12080
I
0.725
Gorai.007G145700
Gossypium raimondii
Gorai.007G145700
I
0.721
chr3.CM0080.200.nd
Lotus japonicus
chr3.CM0080.200.nd
I
0.721
GLYMA03G26520
Glycine max
GLYMA03G26520
I
0.720
Ciclev10023656m.g
Citrus clementina
Ciclev10023656m.g
I
0.718
MTR_8g006825
Medicago truncatula
MTR_8g006825
I
0.717
SapurV1A.0006s0860
Salix purpurea
SapurV1A.0006s0860
I
0.717
Ciclev10023546m.g
Citrus clementina
Ciclev10023546m.g
I
0.717
BRADI1G75040
Brachypodium distachyon
BRADI1G75040
I
0.711
MDP0000830129
Malus domestica
MDP0000830129
I
0.709
POPTR_0002s04030
Populus trichocarpa
POPTR_0002s04030
I
0.709
Lus10022936.g
Linum usitatissimum
Lus10022936.g
I
0.708
Lus10024883.g
Linum usitatissimum
Lus10024883.g
I
0.708
MTR_5g085100
Medicago truncatula
MTR_5g085100
I
0.707
Pavir.Ia01823
Panicum virgatum
Pavir.Ia01823
I
0.706
evm.TU.supercontig_50.28
Carica papaya
evm.TU.supercontig_50.28
I
0.706
MDP0000930655
Malus domestica
MDP0000930655
I
0.705
Pavir.J22854
Panicum virgatum
Pavir.J22854
I
0.704
Pavir.Ib00287
Panicum virgatum
Pavir.Ib00287
I
0.704
AC198979.4_FG009
Zea mays
AC198979.4_FG009
I
0.704
Si039759m.g
Setaria italica
Si039759m.g
I
0.704
Sb01g046920
Sorghum bicolor
Sb01g046920
I
0.704
Eucgr.H03090
Eucalyptus grandis
Eucgr.H03090
I
0.702
Si039310m.g
Setaria italica
Si039310m.g
I
0.701
ONIVA03G03670
Oryza nivara
ONIVA03G03670
I
0.701
LPERR10G08470
Leersia perrieri
LPERR10G08470
I
0.701
BGIOSGA011868
Oryza indica
BGIOSGA011868
I
0.701
Cucsa.260040
Cucumis sativus
Cucsa.260040
I
0.701
Sb01g020555
Sorghum bicolor
Sb01g020555
I
0.701
OS03G0150200
Oryza sativa
OS03G0150200
I
0.701
ORUFI03G03630
Oryza rufipogon
ORUFI03G03630
I
0.701
LPERR03G03540
Leersia perrieri
LPERR03G03540
I
0.701
ORGLA03G0036700
Oryza glaberrima
ORGLA03G0036700
I
0.701
OBART03G03890
Oryza barthii
OBART03G03890
I
0.701
GRMZM2G024871
Zea mays
GRMZM2G024871
I
0.701
OLONG_008277
Oryza longistaminata
OLONG_008277
I
0.701
OGLUM03G03790
Oryza glumaepatula
OGLUM03G03790
I
0.701
TRAES3BF046300130CFD_g
Triticum aestivum
TRAES3BF046300130CFD_g
I
0.699
OPUNC03G03600
Oryza punctata
OPUNC03G03600
I
0.699
Lus10033884.g
Linum usitatissimum
Lus10033884.g
I
0.698
ERF11
Arabidopsis thaliana
AT1G28370
D
0.697
orange1.1g048608m.g
Citrus sinensis
orange1.1g048608m.g
I
0.697
Ciclev10006784m.g
Citrus clementina
Ciclev10006784m.g
I
0.697
Bostr.14547s0008
Boechera stricta
Bostr.14547s0008
I
0.696
Lus10029331.g
Linum usitatissimum
Lus10029331.g
I
0.695
OB03G13950
Oryza brachyantha
OB03G13950
I
0.695
MLOC_238
Hordeum vulgare
MLOC_238
I
0.695
Cucsa.255330
Cucumis sativus
Cucsa.255330
I
0.694
Eucgr.E01561
Eucalyptus grandis
Eucgr.E01561
I
0.692
TCM_020870
Theobroma cacao
TCM_020870
I
0.692
Ca_06034
Cicer arietinum
Ca_06034
I
0.692
Cagra.4714s0001
Capsella grandiflora
Cagra.4714s0001
I
0.691
OB10G18940
Oryza brachyantha
OB10G18940
I
0.691
mgf018792m
Mimulus guttatus
mgf018792m
I
0.691
Carubv10005868m.g
Capsella rubella
Carubv10005868m.g
I
0.691
MTR_7g081795
Medicago truncatula
MTR_7g081795
I
0.690
Thhalv10029212m.g
Eutrema salsugineum
Thhalv10029212m.g
I
0.690
Bostr.19424s0321
Boechera stricta
Bostr.19424s0321
I
0.689
scaffold_604310.1
Arabidopsis lyrata
scaffold_604310.1
I
0.688
POPTR_0010s08330
Populus trichocarpa
POPTR_0010s08330
I
0.688
POPTR_0010s08310
Populus trichocarpa
POPTR_0010s08310
I
0.688
e_gw1.487.2.1
Physcomitrella patens
e_gw1.487.2.1
I
0.688
Pm009384
Prunus mume
Pm009384
I
0.687
MDP0000155543
Malus domestica
MDP0000155543
I
0.687
Ca_07755
Cicer arietinum
Ca_07755
I
0.687
cassava38545.m1
Manihot esculenta
cassava38545.m1
I
0.686
TCM_004062
Theobroma cacao
TCM_004062
I
0.686
gene21165-v1.0-hybrid
Fragaria vesca
gene21165-v1.0-hybrid
I
0.685
Lus10016212.g
Linum usitatissimum
Lus10016212.g
I
0.685
MTR_7g081815
Medicago truncatula
MTR_7g081815
I
0.684
MTR_7g081805
Medicago truncatula
MTR_7g081805
I
0.684
Eucgr.G00002
Eucalyptus grandis
Eucgr.G00002
I
0.684
GSMUA_Achr1G15350_001
Musa acuminata
GSMUA_Achr1G15350_001
I
0.684
Ca_06032
Cicer arietinum
Ca_06032
I
0.684
OBART04G05450
Oryza barthii
OBART04G05450
I
0.683
OB04G14270
Oryza brachyantha
OB04G14270
I
0.683
OGLUM04G04620
Oryza glumaepatula
OGLUM04G04620
I
0.683
chr3.CM0080.270.nc
Lotus japonicus
chr3.CM0080.270.nc
I
0.683
BGIOSGA015474
Oryza indica
BGIOSGA015474
I
0.683
SapurV1A.0292s0020
Salix purpurea
SapurV1A.0292s0020
I
0.683
Bo9g001020
Brassica oleracea
Bo9g001020
I
0.683
SapurV1A.0021s1000
Salix purpurea
SapurV1A.0021s1000
I
0.683
LPERR04G03550
Leersia perrieri
LPERR04G03550
I
0.683
OLONG_027600
Oryza longistaminata
OLONG_027600
I
0.683
ONIVA04G03680
Oryza nivara
ONIVA04G03680
I
0.683
POPTR_0008s16590
Populus trichocarpa
POPTR_0008s16590
I
0.683
ORUFI04G06330
Oryza rufipogon
ORUFI04G06330
I
0.683
cassava41615.m1
Manihot esculenta
cassava41615.m1
I
0.683
Ca_17824
Cicer arietinum
Ca_17824
I
0.683
ORGLA04G0041100
Oryza glaberrima
ORGLA04G0041100
I
0.683
OS04G0257500
Oryza sativa
OS04G0257500
I
0.683
SapurV1A.0094s0620
Salix purpurea
SapurV1A.0094s0620
I
0.682
SapurV1A.1065s0020
Salix purpurea
SapurV1A.1065s0020
I
0.682
Lus10016210.g
Linum usitatissimum
Lus10016210.g
I
0.682
POPTR_0001s11770
Populus trichocarpa
POPTR_0001s11770
I
0.682
LPERR02G21480
Leersia perrieri
LPERR02G21480
I
0.681
Cla007696
Citrullus lanatus
Cla007696
I
0.681
GSMUA_AchrUn_randomG06910_001
Musa acuminata
GSMUA_AchrUn_randomG06910_001
I
0.681
OMERI03G03710
Oryza meridionalis
OMERI03G03710
I
0.680
Si017790m.g
Setaria italica
Si017790m.g
I
0.679
GRMZM2G057386
Zea mays
GRMZM2G057386
I
0.679
OGLUM02G26870
Oryza glumaepatula
OGLUM02G26870
I
0.679
Pm018418
Prunus mume
Pm018418
I
0.679
ONIVA02G28840
Oryza nivara
ONIVA02G28840
I
0.679
OPUNC02G24090
Oryza punctata
OPUNC02G24090
I
0.679
TCM_005705
Theobroma cacao
TCM_005705
I
0.679
Pavir.Ab02473
Panicum virgatum
Pavir.Ab02473
I
0.679
OBART02G26470
Oryza barthii
OBART02G26470
I
0.679
Gorai.008G213900
Gossypium raimondii
Gorai.008G213900
I
0.679
ORUFI02G27860
Oryza rufipogon
ORUFI02G27860
I
0.679
ORGLA02G0226700
Oryza glaberrima
ORGLA02G0226700
I
0.679
Pavir.Aa01181
Panicum virgatum
Pavir.Aa01181
I
0.679
BGIOSGA008740
Oryza indica
BGIOSGA008740
I
0.679
Lus10011830.g
Linum usitatissimum
Lus10011830.g
I
0.678
PRUPE_ppa013137mg
Prunus persica
PRUPE_ppa013137mg
I
0.678
Pavir.Ib03119
Panicum virgatum
Pavir.Ib03119
I
0.678
chr3.CM0080.80.nd
Lotus japonicus
chr3.CM0080.80.nd
I
0.678
LjSGA_078116.1
Lotus japonicus
LjSGA_078116.1
I
0.678
GLYMA03G26437
Glycine max
GLYMA03G26437
I
0.678
Gorai.001G176600
Gossypium raimondii
Gorai.001G176600
I
0.677
TCM_020869
Theobroma cacao
TCM_020869
I
0.677
Gorai.005G049200
Gossypium raimondii
Gorai.005G049200
I
0.677
LPERR03G35710
Leersia perrieri
LPERR03G35710
I
0.677