MDP0000286915 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000286915 T009075_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.771 0.878
ERF11
M01606_2.00 		Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN		 PBM
Weirauch et al.(2014)
pTH8117 		0.697 0.653
ERF11
M06575_2.00 		Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF11_colamp_a 		0.697 0.653
ERF11
M06576_2.00 		Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN		 Dap-seq
OMalley et al.(2016)
ERF11_col_b 		0.697 0.653
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000286915 AP2 22 74

Links

Other AP2 family TFs
Other Malus domestica TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm020605 Prunus mume Pm020605 I 0.812
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.812
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.811
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.777
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.776
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.772
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.771
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.771
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.771
ERF098 Arabidopsis thaliana AT3G23230 D 0.771
Cla015065 Citrullus lanatus Cla015065 I 0.769
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.769
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.763
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.763
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.762
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.762
mgf026487m Mimulus guttatus mgf026487m I 0.750
mgf021973m Mimulus guttatus mgf021973m I 0.748
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.747
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.744
29584.m000235 Ricinus communis 29584.m000235 I 0.742
TCM_004061 Theobroma cacao TCM_004061 I 0.742
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.742
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.742
Bo7g040810 Brassica oleracea Bo7g040810 I 0.738
Bra014925 Brassica rapa Bra014925 I 0.738
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.737
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.737
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.737
Cla021851 Citrullus lanatus Cla021851 I 0.736
MDP0000312701 Malus domestica MDP0000312701 I 0.736
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.734
gene08073-v1.0-hybrid Fragaria vesca gene08073-v1.0-hybrid I 0.732
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.731
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.728
Bra023748 Brassica rapa Bra023748 I 0.728
Bo1g102220 Brassica oleracea Bo1g102220 I 0.728
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.726
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.726
Ca_12080 Cicer arietinum Ca_12080 I 0.725
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.721
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.721
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.720
Ciclev10023656m.g Citrus clementina Ciclev10023656m.g I 0.718
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.717
SapurV1A.0006s0860 Salix purpurea SapurV1A.0006s0860 I 0.717
Ciclev10023546m.g Citrus clementina Ciclev10023546m.g I 0.717
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.711
MDP0000830129 Malus domestica MDP0000830129 I 0.709
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I 0.709
Lus10022936.g Linum usitatissimum Lus10022936.g I 0.708
Lus10024883.g Linum usitatissimum Lus10024883.g I 0.708
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.707
Pavir.Ia01823 Panicum virgatum Pavir.Ia01823 I 0.706
evm.TU.supercontig_50.28 Carica papaya evm.TU.supercontig_50.28 I 0.706
MDP0000930655 Malus domestica MDP0000930655 I 0.705
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.704
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.704
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.704
Si039759m.g Setaria italica Si039759m.g I 0.704
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.704
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.702
Si039310m.g Setaria italica Si039310m.g I 0.701
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.701
LPERR10G08470 Leersia perrieri LPERR10G08470 I 0.701
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.701
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.701
Sb01g020555 Sorghum bicolor Sb01g020555 I 0.701
OS03G0150200 Oryza sativa OS03G0150200 I 0.701
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.701
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.701
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.701
OBART03G03890 Oryza barthii OBART03G03890 I 0.701
GRMZM2G024871 Zea mays GRMZM2G024871 I 0.701
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.701
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.701
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.699
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.699
Lus10033884.g Linum usitatissimum Lus10033884.g I 0.698
ERF11 Arabidopsis thaliana AT1G28370 D 0.697
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.697
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.697
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.696
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.695
OB03G13950 Oryza brachyantha OB03G13950 I 0.695
MLOC_238 Hordeum vulgare MLOC_238 I 0.695
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.694
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.692
TCM_020870 Theobroma cacao TCM_020870 I 0.692
Ca_06034 Cicer arietinum Ca_06034 I 0.692
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.691
OB10G18940 Oryza brachyantha OB10G18940 I 0.691
mgf018792m Mimulus guttatus mgf018792m I 0.691
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.691
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.690
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.690
Bostr.19424s0321 Boechera stricta Bostr.19424s0321 I 0.689
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.688
POPTR_0010s08330 Populus trichocarpa POPTR_0010s08330 I 0.688
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.688
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.688
Pm009384 Prunus mume Pm009384 I 0.687
MDP0000155543 Malus domestica MDP0000155543 I 0.687
Ca_07755 Cicer arietinum Ca_07755 I 0.687
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.686
TCM_004062 Theobroma cacao TCM_004062 I 0.686
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.685
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.685
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.684
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.684
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.684
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.684
Ca_06032 Cicer arietinum Ca_06032 I 0.684
OBART04G05450 Oryza barthii OBART04G05450 I 0.683
OB04G14270 Oryza brachyantha OB04G14270 I 0.683
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.683
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.683
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.683
SapurV1A.0292s0020 Salix purpurea SapurV1A.0292s0020 I 0.683
Bo9g001020 Brassica oleracea Bo9g001020 I 0.683
SapurV1A.0021s1000 Salix purpurea SapurV1A.0021s1000 I 0.683
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.683
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.683
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.683
POPTR_0008s16590 Populus trichocarpa POPTR_0008s16590 I 0.683
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.683
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.683
Ca_17824 Cicer arietinum Ca_17824 I 0.683
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.683
OS04G0257500 Oryza sativa OS04G0257500 I 0.683
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.682
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.682
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.682
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.682
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.681
Cla007696 Citrullus lanatus Cla007696 I 0.681
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.681
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.680
Si017790m.g Setaria italica Si017790m.g I 0.679
GRMZM2G057386 Zea mays GRMZM2G057386 I 0.679
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I 0.679
Pm018418 Prunus mume Pm018418 I 0.679
ONIVA02G28840 Oryza nivara ONIVA02G28840 I 0.679
OPUNC02G24090 Oryza punctata OPUNC02G24090 I 0.679
TCM_005705 Theobroma cacao TCM_005705 I 0.679
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I 0.679
OBART02G26470 Oryza barthii OBART02G26470 I 0.679
Gorai.008G213900 Gossypium raimondii Gorai.008G213900 I 0.679
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I 0.679
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I 0.679
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I 0.679
BGIOSGA008740 Oryza indica BGIOSGA008740 I 0.679
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.678
PRUPE_ppa013137mg Prunus persica PRUPE_ppa013137mg I 0.678
Pavir.Ib03119 Panicum virgatum Pavir.Ib03119 I 0.678
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.678
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.678
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.678
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I 0.677
TCM_020869 Theobroma cacao TCM_020869 I 0.677
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.677
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.677