MDP0000403580 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000403580 T009116_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.850 0.960
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.849 0.960
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.829 0.900
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.808 0.880
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.778 0.840
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.778 0.840
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.771 0.840
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.771 0.840
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.745 0.740
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.745 0.740
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.745 0.740
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.733 0.780
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.733 0.780
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.726 0.680
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.723 0.680
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.721 0.700
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.721 0.700
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.721 0.700
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN

NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.718 0.680
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.718 0.760
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.711 0.640
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.711 0.640
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.710 0.700
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.708 0.700
0100010458
M01644_2.00
Ostreococcus tauri
MGCCGSCR

YGSCGGCK
PBM
Weirauch et al.(2014)
pTH9447
0.707 0.720
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.703 0.720
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.703 0.720
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.703 0.720
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.702 0.640
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.699 0.680
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.698 0.680
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.698 0.680
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.695 0.700
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.695 0.700
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.695 0.700
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.695 0.760
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.692 0.680
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.692 0.680
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.690 0.740
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY

RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.690 0.720
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.689 0.680
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.688 0.660
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.688 0.700
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.688 0.700
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.685 0.700
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.685 0.700
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.680 0.700
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000403580 AP2 112 163

Links

Other AP2 family TFs
Other Malus domestica TFs

1462 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
adnp Xenopus tropicalis XB-GENE-852807 N 0.000
ADNP Tupaia belangeri ENSTBEG00000002890 N 0.000
ENSSTOG00000023722 Ictidomys tridecemlineatus ENSSTOG00000023722 N 0.000
ADNP Sus scrofa ENSSSCG00000007473 N 0.000
ENSSHAG00000018763 Sarcophilus harrisii ENSSHAG00000018763 N 0.000
ADNP Sorex araneus ENSSARG00000008308 N 0.000
Adnp Rattus norvegicus ENSRNOG00000010975 N 0.000
ADNP Pteropus vampyrus ENSPVAG00000016481 N 0.000
ADNP Pan troglodytes ENSPTRG00000013623 N 0.000
ENSPSIG00000015209 Pelodiscus sinensis ENSPSIG00000015209 N 0.000
ENSPPYG00000011130 Pongo abelii ENSPPYG00000011130 N 0.000
ADNP Procavia capensis ENSPCAG00000006836 N 0.000
ENSPANG00000021104 Papio anubis ENSPANG00000021104 N 0.000
ADNP Ochotona princeps ENSOPRG00000002985 N 0.000
ADNP Taeniopygia guttata ENSTGUG00000008662 N 0.000
ENSTSYG00000012059 Tarsius syrichta ENSTSYG00000012059 N 0.000
ADNP Tursiops truncatus ENSTTRG00000009011 N 0.000
Tal_R004420 Tyto alba Tal_R004420 N 0.000
Pvit_03339 Pogona vitticeps Pvit_03339 N 0.000
Ogr08135 Ophisaurus gracilis Ogr08135 N 0.000
Myotis_brandtii_ADNP_10026361 Myotis brandtii Myotis_brandtii_ADNP_10026361 N 0.000
Gfo_R009593 Geospiza fortis Gfo_R009593 N 0.000
ENSP00000360662 Macaca fascicularis ENSP00000360662 N 0.000
ENSBTAP00000000445-D1 Bos grunniens ENSBTAP00000000445-D1 N 0.000
Cmyd_10017455 Chelonia mydas Cmyd_10017455 N 0.000
Brh_R005456 Buceros rhinoceros Brh_R005456 N 0.000
Alligator_sinensis_CCG001710.1 Alligator sinensis Alligator_sinensis_CCG001710.1 N 0.000
Afo_R003260 Aptenodytes forsteri Afo_R003260 N 0.000
Aan_R015824 Calypte anna Aan_R015824 N 0.000
ADNP Vicugna pacos ENSVPAG00000004917 N 0.000
ADNP Otolemur garnettii ENSOGAG00000005381 N 0.000
ADNP Oryctolagus cuniculus ENSOCUG00000014704 N 0.000
ENSFALG00000013032 Ficedula albicollis ENSFALG00000013032 N 0.000
ADNP Echinops telfairi ENSETEG00000011996 N 0.000
ADNP Erinaceus europaeus ENSEEUG00000007786 N 0.000
ADNP Equus caballus ENSECAG00000009307 N 0.000
ENSDNOG00000001749 Dasypus novemcinctus ENSDNOG00000001749 N 0.000
adnpb Danio rerio ENSDARG00000074293 N 0.000
ENSCSAG00000015205 Chlorocebus sabaeus ENSCSAG00000015205 N 0.000
ADNP Cavia porcellus ENSCPOG00000001591 N 0.000
ADNP Callithrix jacchus ENSCJAG00000000563 N 0.000
ADNP Choloepus hoffmanni ENSCHOG00000011573 N 0.000
ADNP Canis familiaris ENSCAFG00000011576 N 0.000
ADNP Bos taurus ENSBTAG00000000340 N 0.000
ENSAPLG00000007870 Anas platyrhynchos ENSAPLG00000007870 N 0.000
ADNP Felis catus ENSFCAG00000025702 N 0.000
ADNP Homo sapiens ENSG00000101126 N 0.000
ADNP Gallus gallus ENSGALG00000007989 N 0.000
ENSOARG00000013868 Ovis aries ENSOARG00000013868 N 0.000
ADNP Ornithorhynchus anatinus ENSOANG00000008675 N 0.000
ENSNLEG00000006995 Nomascus leucogenys ENSNLEG00000006995 N 0.000
Adnp Mus musculus ENSMUSG00000051149 N 0.000
ENSMPUG00000017548 Mustela putorius furo ENSMPUG00000017548 N 0.000
ADNP Monodelphis domestica ENSMODG00000016350 N 0.000
ADNP Macaca mulatta ENSMMUG00000002761 N 0.000
ADNP Myotis lucifugus ENSMLUG00000000002 N 0.000
ADNP Meleagris gallopavo ENSMGAG00000009385 N 0.000
ENSMEUG00000007857 Macropus eugenii ENSMEUG00000007857 N 0.000
ADNP Loxodonta africana ENSLAFG00000004139 N 0.000
ENSLACG00000009474 Latimeria chalumnae ENSLACG00000009474 N 0.000
ADNP Gorilla gorilla ENSGGOG00000003120 N 0.000
ENSAMEG00000013360 Ailuropoda melanoleuca ENSAMEG00000013360 N 0.000