MDP0000704216 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000704216 T009157_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.796 0.900
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.796 0.900
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.795 0.920
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.795 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000704216 AP2 34 85

Links

Other AP2 family TFs
Other Malus domestica TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.825
mgf025452m Mimulus guttatus mgf025452m I 0.824
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.815
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.805
Bo8g102870 Brassica oleracea Bo8g102870 I 0.804
Bra031069 Brassica rapa Bra031069 I 0.804
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.802
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.801
mgf024162m Mimulus guttatus mgf024162m I 0.800
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.798
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.797
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.796
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.796
ERF018 Arabidopsis thaliana AT1G74930 D 0.796
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.795
29739.m003716 Ricinus communis 29739.m003716 I 0.795
Pm027117 Prunus mume Pm027117 I 0.795
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.795
ERF017 Arabidopsis thaliana AT1G19210 D 0.795
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.795
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.795
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.795
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.795
mgf021940m Mimulus guttatus mgf021940m I 0.795
Bra015882 Brassica rapa Bra015882 I 0.795
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.794
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.794
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.794
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.794
TCM_037486 Theobroma cacao TCM_037486 I 0.794
Bo6g119120 Brassica oleracea Bo6g119120 I 0.793
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.792
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.791
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.790
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.789
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.789
MDP0000649022 Malus domestica MDP0000649022 I 0.788
Bo6g086740 Brassica oleracea Bo6g086740 I 0.788
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.788
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.788
Ca_09124 Cicer arietinum Ca_09124 I 0.788
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.788
Bra003780 Brassica rapa Bra003780 I 0.788
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.786
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.786
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.786
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.786
TCM_037415 Theobroma cacao TCM_037415 I 0.785
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.783
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.783
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.783
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.780
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.780
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.780
Bra016518 Brassica rapa Bra016518 I 0.779
Bo8g068370 Brassica oleracea Bo8g068370 I 0.779
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.778
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.778
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.778
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.776
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.774
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.773
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.773
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.773
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.771
Cla007584 Citrullus lanatus Cla007584 I 0.769
Bra025719 Brassica rapa Bra025719 I 0.768
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.766
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.766
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.766
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.765
Ca_01683 Cicer arietinum Ca_01683 I 0.765
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.764
Cla011318 Citrullus lanatus Cla011318 I 0.764
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.764
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.763
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.763
29739.m003647 Ricinus communis 29739.m003647 I 0.762
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.758
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.758
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.757
Si019636m.g Setaria italica Si019636m.g I 0.757
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.755
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.755
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.752
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.749
Bo2g023630 Brassica oleracea Bo2g023630 I 0.748
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.747
Bra020162 Brassica rapa Bra020162 I 0.747
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.746
PK18548.1 Cannabis sativa PK18548.1 I 0.737
Ca_19295 Cicer arietinum Ca_19295 I 0.737
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.736
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.735
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.735
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.735
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.735
Bra006599 Brassica rapa Bra006599 I 0.734
Bo3g015600 Brassica oleracea Bo3g015600 I 0.734
Ca_19297 Cicer arietinum Ca_19297 I 0.733
Bo9g149820 Brassica oleracea Bo9g149820 I 0.732
Bra002377 Brassica rapa Bra002377 I 0.732
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.732
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.732
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.732
Ca_19296 Cicer arietinum Ca_19296 I 0.732
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.731
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.731
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.730
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.728
Si008104m.g Setaria italica Si008104m.g I 0.727
ERF016 Arabidopsis thaliana AT5G21960 I 0.726
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.726
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.726
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.725
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.725
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.725
Cla022291 Citrullus lanatus Cla022291 I 0.725
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.723
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.715
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.710
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.710
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.710
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.710
OS02G0781300 Oryza sativa OS02G0781300 I 0.710
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.710
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.710
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.710
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.705
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.703
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.700
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.695