MDP0000756341 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000756341 T009161_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.774 0.920
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.774 0.920
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.768 0.920
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.767 0.880
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.767 0.880
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.766 0.860
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.766 0.860
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.765 0.920
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.765 0.920
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.765 0.920
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.765 0.920
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.741 0.900
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.741 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000756341 AP2 31 82

Links

Other AP2 family TFs
Other Malus domestica TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.814
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.803
Cla022937 Citrullus lanatus Cla022937 I 0.797
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.797
TCM_033791 Theobroma cacao TCM_033791 I 0.795
Bra014056 Brassica rapa Bra014056 I 0.795
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.795
Cla020961 Citrullus lanatus Cla020961 I 0.795
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.795
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.795
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.795
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.792
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.792
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.792
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.792
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.789
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.787
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.787
PK15612.1 Cannabis sativa PK15612.1 I 0.786
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.785
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.785
OS06G0166400 Oryza sativa OS06G0166400 I 0.785
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.785
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.785
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.785
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.785
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.785
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.785
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.785
OBART06G04460 Oryza barthii OBART06G04460 I 0.785
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.785
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.785
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.784
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.784
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.784
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.782
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.782
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.782
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.782
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.782
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.782
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.782
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.782
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.782
30170.m013843 Ricinus communis 30170.m013843 I 0.782
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.782
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.782
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.782
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.782
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.782
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.779
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.779
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.779
Ca_02170 Cicer arietinum Ca_02170 I 0.779
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.779
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.779
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.779
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.778
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.777
Bra011744 Brassica rapa Bra011744 I 0.777
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.777
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.777
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.777
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.776
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.776
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.776
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.776
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.776
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.776
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.776
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.776
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.776
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.776
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.776
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.776
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.776
OS04G0648900 Oryza sativa OS04G0648900 I 0.776
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.776
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.776
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.774
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.774
MDP0000179962 Malus domestica MDP0000179962 I 0.774
MDP0000125673 Malus domestica MDP0000125673 I 0.774
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.774
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.774
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.773
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.773
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.773
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.773
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.773
TCM_000669 Theobroma cacao TCM_000669 I 0.773
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.773
28718.m000038 Ricinus communis 28718.m000038 I 0.772
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.768
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.768
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.768
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.768
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.768
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.768
Bo7g118430 Brassica oleracea Bo7g118430 I 0.768
Bra017811 Brassica rapa Bra017811 I 0.768
Bra032173 Brassica rapa Bra032173 I 0.768
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.768
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.768
Bo4g151460 Brassica oleracea Bo4g151460 I 0.768
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.768
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.768
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.768
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.768
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.767
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.767
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.767
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.767
Bra036061 Brassica rapa Bra036061 I 0.767
mgf000289m Mimulus guttatus mgf000289m I 0.767
ERF010 Arabidopsis thaliana AT5G67190 D 0.767
Bo8g079660 Brassica oleracea Bo8g079660 I 0.767
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.767
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.767
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.767
Bo7g063980 Brassica oleracea Bo7g063980 I 0.767
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.766
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.766
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.766
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.766
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.766
ERF011 Arabidopsis thaliana AT3G50260 D 0.766
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.766
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.766
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.766
ERF008 Arabidopsis thaliana AT2G23340 D 0.765
mgf021115m Mimulus guttatus mgf021115m I 0.764
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.763
Bo9g020380 Brassica oleracea Bo9g020380 I 0.761
Bra037124 Brassica rapa Bra037124 I 0.761
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.761
Bo1g004940 Brassica oleracea Bo1g004940 I 0.758
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.758
mgf006561m Mimulus guttatus mgf006561m I 0.758
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.757
Bra012140 Brassica rapa Bra012140 I 0.756
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.756
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.755
mgf025363m Mimulus guttatus mgf025363m I 0.755
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.755
Cla014175 Citrullus lanatus Cla014175 I 0.755
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.755
Cla020550 Citrullus lanatus Cla020550 I 0.755
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.752
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.750
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.749
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.746
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.744
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.741
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.741
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.737
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.734
Ca_01556 Cicer arietinum Ca_01556 I 0.733
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.733
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.728
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.726
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.721
Pm005312 Prunus mume Pm005312 N 0.487