MDP0000930655 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000930655 T009200_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.761 0.857
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.694 0.714
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.694 0.714
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.694 0.714
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.688 0.735
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.688 0.735
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.688 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000930655 AP2 23 75

Links

Other AP2 family TFs
Other Malus domestica TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000830129 Malus domestica MDP0000830129 I 0.821
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.787
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.787
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.785
Ca_12080 Cicer arietinum Ca_12080 I 0.775
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.761
ERF098 Arabidopsis thaliana AT3G23230 D 0.761
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.761
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.761
Gorai.011G172800 Gossypium raimondii Gorai.011G172800 I 0.758
Cla021851 Citrullus lanatus Cla021851 I 0.756
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.754
Pm009383 Prunus mume Pm009383 I 0.753
PRUPE_ppa018601mg Prunus persica PRUPE_ppa018601mg I 0.753
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.751
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.751
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.742
gene11441-v1.0-hybrid Fragaria vesca gene11441-v1.0-hybrid I 0.741
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.734
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.731
TCM_020870 Theobroma cacao TCM_020870 I 0.730
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.728
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.728
Bra014925 Brassica rapa Bra014925 I 0.727
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.727
Pm020605 Prunus mume Pm020605 I 0.727
Bo7g040810 Brassica oleracea Bo7g040810 I 0.727
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.727
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.727
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.727
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.726
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.725
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.725
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.725
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.725
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.724
Cla015065 Citrullus lanatus Cla015065 I 0.724
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.720
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.719
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.719
Bra023748 Brassica rapa Bra023748 I 0.718
POPTR_0008s16600 Populus trichocarpa POPTR_0008s16600 I 0.718
Bo1g102220 Brassica oleracea Bo1g102220 I 0.718
cassava3323.m1 Manihot esculenta cassava3323.m1 I 0.714
Ca_06034 Cicer arietinum Ca_06034 I 0.712
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.711
mgf026487m Mimulus guttatus mgf026487m I 0.711
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I 0.710
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I 0.710
mgf021973m Mimulus guttatus mgf021973m I 0.708
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.707
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.707
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.706
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.706
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.706
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.705
29603.m000509 Ricinus communis 29603.m000509 I 0.705
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.705
MDP0000286915 Malus domestica MDP0000286915 I 0.705
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.704
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.704
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.704
Ca_06032 Cicer arietinum Ca_06032 I 0.704
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.704
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.704
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.703
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.703
GLYMA18G48741 Glycine max GLYMA18G48741 I 0.702
Bo9g001020 Brassica oleracea Bo9g001020 I 0.701
chr3.CM0080.190.nd Lotus japonicus chr3.CM0080.190.nd I 0.700
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.700
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.699
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I 0.695
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.694
TCM_004061 Theobroma cacao TCM_004061 I 0.694
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.694
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.694
ERF3 Arabidopsis thaliana AT1G50640 D 0.694
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.693
29584.m000235 Ricinus communis 29584.m000235 I 0.693
OMERI01G22970 Oryza meridionalis OMERI01G22970 I 0.692
OS01G0657400 Oryza sativa OS01G0657400 I 0.692
OLONG_003671 Oryza longistaminata OLONG_003671 I 0.692
OB01G34420 Oryza brachyantha OB01G34420 I 0.692
OBART01G25240 Oryza barthii OBART01G25240 I 0.692
OGLUM01G29010 Oryza glumaepatula OGLUM01G29010 I 0.692
ONIVA01G28490 Oryza nivara ONIVA01G28490 I 0.692
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.692
ORUFI01G28060 Oryza rufipogon ORUFI01G28060 I 0.692
BGIOSGA001090 Oryza indica BGIOSGA001090 I 0.692
ORGLA01G0205500 Oryza glaberrima ORGLA01G0205500 I 0.692
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.691
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.691
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.691
OBART04G05450 Oryza barthii OBART04G05450 I 0.691
OS04G0257500 Oryza sativa OS04G0257500 I 0.691
OB04G14270 Oryza brachyantha OB04G14270 I 0.691
gene08073-v1.0-hybrid Fragaria vesca gene08073-v1.0-hybrid I 0.691
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.691
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.691
TRAES3BF051200070CFD_g Triticum aestivum TRAES3BF051200070CFD_g I 0.691
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.691
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.691
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.691
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.690
Cla007696 Citrullus lanatus Cla007696 I 0.690
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.690
Cla021852 Citrullus lanatus Cla021852 I 0.690
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.690
Eucgr.H03091 Eucalyptus grandis Eucgr.H03091 I 0.690
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.689
Bra037630 Brassica rapa Bra037630 I 0.688
Bra004873 Brassica rapa Bra004873 I 0.688
GRMZM2G057386 Zea mays GRMZM2G057386 I 0.688
Bo4g195220 Brassica oleracea Bo4g195220 I 0.688
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.688
ONIVA02G28840 Oryza nivara ONIVA02G28840 I 0.688
Bo4g024140 Brassica oleracea Bo4g024140 I 0.688
ERF13 Arabidopsis thaliana AT2G44840 D 0.688
OPUNC02G24090 Oryza punctata OPUNC02G24090 I 0.688
BGIOSGA008740 Oryza indica BGIOSGA008740 I 0.688
OBART02G26470 Oryza barthii OBART02G26470 I 0.688
ORGLA02G0226700 Oryza glaberrima ORGLA02G0226700 I 0.688
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.688
OGLUM02G26870 Oryza glumaepatula OGLUM02G26870 I 0.688
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.688
ORUFI02G27860 Oryza rufipogon ORUFI02G27860 I 0.688
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.688
Si017790m.g Setaria italica Si017790m.g I 0.688
Pavir.Ab02473 Panicum virgatum Pavir.Ab02473 I 0.688
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.688
Pavir.Aa01181 Panicum virgatum Pavir.Aa01181 I 0.688
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.687
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.687
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.686
SapurV1A.0006s0860 Salix purpurea SapurV1A.0006s0860 I 0.686
Ca_07755 Cicer arietinum Ca_07755 I 0.685
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.684
Lus10021196.g Linum usitatissimum Lus10021196.g I 0.684
TCM_020869 Theobroma cacao TCM_020869 I 0.684
Cla013723 Citrullus lanatus Cla013723 I 0.684
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.683
BRADI2G07357 Brachypodium distachyon BRADI2G07357 I 0.683
TCM_004062 Theobroma cacao TCM_004062 I 0.683
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.682
Ca_12205 Cicer arietinum Ca_12205 I 0.682
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.681
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.681
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.681
MLOC_10225 Hordeum vulgare MLOC_10225 I 0.681
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.681
LPERR01G21530 Leersia perrieri LPERR01G21530 I 0.681
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.681
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.681
VIT_07s0005g03190 Vitis vinifera VIT_07s0005g03190 I 0.681
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.681
Cla010886 Citrullus lanatus Cla010886 I 0.681
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.680
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.680
30174.m008755 Ricinus communis 30174.m008755 I 0.680
Lus10032499.g Linum usitatissimum Lus10032499.g I 0.680
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.680
Ciclev10023656m.g Citrus clementina Ciclev10023656m.g I 0.680
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.680
MDP0000236605 Malus domestica MDP0000236605 I 0.679
orange1.1g047334m.g Citrus sinensis orange1.1g047334m.g I 0.679
MDP0000310904 Malus domestica MDP0000310904 I 0.679
MDP0000457509 Malus domestica MDP0000457509 I 0.679
GRMZM2G160971 Zea mays GRMZM2G160971 I 0.679
Pavir.Eb01758 Panicum virgatum Pavir.Eb01758 I 0.679
GRMZM2G142179 Zea mays GRMZM2G142179 I 0.679
BRADI2G45530 Brachypodium distachyon BRADI2G45530 I 0.679
Pavir.Eb00092 Panicum virgatum Pavir.Eb00092 I 0.679
Pavir.Ea02288 Panicum virgatum Pavir.Ea02288 I 0.679
GSMUA_Achr9G28840_001 Musa acuminata GSMUA_Achr9G28840_001 I 0.679
Pavir.Ea00119 Panicum virgatum Pavir.Ea00119 I 0.679
LPERR01G07340 Leersia perrieri LPERR01G07340 I 0.679
OGLUM01G08910 Oryza glumaepatula OGLUM01G08910 I 0.679
Sb03g001296 Sorghum bicolor Sb03g001296 I 0.679
OS01G0224100 Oryza sativa OS01G0224100 I 0.679
ORUFI01G08530 Oryza rufipogon ORUFI01G08530 I 0.679
Sb03g029990 Sorghum bicolor Sb03g029990 I 0.679
Si002247m.g Setaria italica Si002247m.g I 0.679
TCM_005706 Theobroma cacao TCM_005706 I 0.679
Ciclev10021285m.g Citrus clementina Ciclev10021285m.g I 0.679
Ciclev10023546m.g Citrus clementina Ciclev10023546m.g I 0.679
ORGLA01G0069400 Oryza glaberrima ORGLA01G0069400 I 0.679
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.679
OPUNC01G07600 Oryza punctata OPUNC01G07600 I 0.679
OMERI01G07770 Oryza meridionalis OMERI01G07770 I 0.679
ONIVA01G10020 Oryza nivara ONIVA01G10020 I 0.679
Cucsa.383680 Cucumis sativus Cucsa.383680 I 0.678
Lus10042996.g Linum usitatissimum Lus10042996.g I 0.678
TRAES3BF017100030CFD_g Triticum aestivum TRAES3BF017100030CFD_g I 0.678
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.678
GRMZM2G044077 Zea mays GRMZM2G044077 I 0.678
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.678
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I 0.678
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.678
MLOC_58641 Hordeum vulgare MLOC_58641 I 0.678
GSMUA_Achr6G14240_001 Musa acuminata GSMUA_Achr6G14240_001 I 0.677
orange1.1g023209m.g Citrus sinensis orange1.1g023209m.g I 0.677
Pm017696 Prunus mume Pm017696 I 0.677
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.677
Ciclev10005570m.g Citrus clementina Ciclev10005570m.g I 0.677
GRMZM2G328197 Zea mays GRMZM2G328197 I 0.677
GSMUA_Achr10G01110_001 Musa acuminata GSMUA_Achr10G01110_001 I 0.677
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.677
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.677