orange1.1g009943m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g009943m.g T009205_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.831 0.939
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.800 0.869
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.799 0.889
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.784 0.818
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009943m AP2 158 208
orange1.1g009943m AP2 250 301
orange1.1g010002m AP2 158 208
orange1.1g010002m AP2 250 301
orange1.1g010040m AP2 158 208
orange1.1g010040m AP2 250 301
orange1.1g012583m AP2 158 208
orange1.1g012583m AP2 250 301
orange1.1g012632m AP2 158 208
orange1.1g012632m AP2 250 301
orange1.1g013009m AP2 158 208
orange1.1g013009m AP2 250 301
orange1.1g019391m AP2 158 208
orange1.1g019391m AP2 250 301
orange1.1g019609m AP2 158 208
orange1.1g019609m AP2 250 301
orange1.1g020517m AP2 158 208
orange1.1g020517m AP2 250 301

Links

Other AP2 family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action