orange1.1g010454m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g010454m.g T009207_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.859 0.969
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.807 0.989
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.845 0.959
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.756 0.839
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g010454m AP2 171 220
orange1.1g010454m AP2 263 314
orange1.1g011009m AP2 171 220
orange1.1g011009m AP2 263 314
orange1.1g011312m AP2 171 220
orange1.1g011312m AP2 257 308
orange1.1g016650m AP2 171 220
orange1.1g016650m AP2 263 314
orange1.1g022082m AP2 171 220
orange1.1g022082m AP2 263 303

Links

Other AP2 family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action