orange1.1g035756m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g035756m.g T009255_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.792 0.920
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.792 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g035756m AP2 15 66

Links

Other AP2 family TFs
Other Citrus sinensis TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.826
Pm004269 Prunus mume Pm004269 I 0.820
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.820
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.811
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.811
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.811
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.811
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.811
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.807
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.805
MDP0000283350 Malus domestica MDP0000283350 I 0.801
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.800
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.800
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.800
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.800
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.799
Bo2g072910 Brassica oleracea Bo2g072910 I 0.792
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.792
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.792
ERF021 Arabidopsis thaliana AT1G71450 D 0.792
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.792
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.790
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.789
Cla012665 Citrullus lanatus Cla012665 I 0.789
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.786
Bra016136 Brassica rapa Bra016136 I 0.783
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.783
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.783
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.781
Bra007975 Brassica rapa Bra007975 I 0.777
TCM_036269 Theobroma cacao TCM_036269 I 0.776
Bo6g113020 Brassica oleracea Bo6g113020 I 0.776
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.775
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.774
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.773
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.771
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.770
28118.m000034 Ricinus communis 28118.m000034 I 0.769
TCM_036270 Theobroma cacao TCM_036270 I 0.765
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.764
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.758
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.758
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.755
Bra003924 Brassica rapa Bra003924 I 0.753
Bo6g094210 Brassica oleracea Bo6g094210 I 0.753
Bo8g027240 Brassica oleracea Bo8g027240 I 0.752
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.751
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.749
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.749
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.748
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.748
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.748
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.747
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.747
ERF022 Arabidopsis thaliana AT1G33760 I 0.746
Bra010210 Brassica rapa Bra010210 I 0.746
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.742
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.742
Pm004272 Prunus mume Pm004272 I 0.737
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.736
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.733
27805.m000021 Ricinus communis 27805.m000021 I 0.732
Bo5g086680 Brassica oleracea Bo5g086680 I 0.731
Cla012661 Citrullus lanatus Cla012661 I 0.727
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.727
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.726
Bra028009 Brassica rapa Bra028009 I 0.726
MDP0000122739 Malus domestica MDP0000122739 I 0.724
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.724
MDP0000151428 Malus domestica MDP0000151428 I 0.724
MDP0000122740 Malus domestica MDP0000122740 I 0.724
Si026882m.g Setaria italica Si026882m.g I 0.723
Bo6g046850 Brassica oleracea Bo6g046850 I 0.720
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.718
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.718
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.717
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.716
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.716
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.716
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.716
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.715
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.713
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.711
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.707
Ca_15064 Cicer arietinum Ca_15064 I 0.707
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.705
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.705
OB11G16300 Oryza brachyantha OB11G16300 I 0.703
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.703
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.703
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.703
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.703
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.703
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.703
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.703
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.703
OS11G0242300 Oryza sativa OS11G0242300 I 0.703
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.703
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.703
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.703
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.703
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.702
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.701
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.700
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.699
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.697
F775_17299 Aegilops tauschii F775_17299 I 0.697
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.697
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.697
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.697
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.697
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.696
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.693
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.690
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.690
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.689
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.679
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.678
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.678
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.678
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.678