Pavir.Ab02943 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ab02943 T009353_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab02943.1.p AP2 179 239
Pavir.Ab02943.1.p AP2 281 333

Links

Other AP2 family TFs
Other Panicum virgatum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G59300 Brachypodium distachyon BRADI3G59300 N 0.897
OB02G39430 Oryza brachyantha OB02G39430 N 0.895
Si017580m.g Setaria italica Si017580m.g N 0.894
OS02G0747600 Oryza sativa OS02G0747600 N 0.891
ORGLA02G0280000 Oryza glaberrima ORGLA02G0280000 N 0.891
GRMZM2G130459 Zea mays GRMZM2G130459 N 0.890
Sb04g027940 Sorghum bicolor Sb04g027940 N 0.888
Pavir.Aa00475 Panicum virgatum Pavir.Aa00475 N 0.886
MLOC_76689 Hordeum vulgare MLOC_76689 N 0.872
Traes_6BL_340C2A897 Triticum aestivum Traes_6BL_340C2A897 N 0.865
Traes_6DL_2BAA4B7AA Triticum aestivum Traes_6DL_2BAA4B7AA N 0.864
OPUNC02G30010 Oryza punctata OPUNC02G30010 N 0.847
ORUFI02G34150 Oryza rufipogon ORUFI02G34150 N 0.835
OBART02G32450 Oryza barthii OBART02G32450 N 0.835
Traes_6AL_CE4E76E1A Triticum aestivum Traes_6AL_CE4E76E1A N 0.831
OMERI02G31100 Oryza meridionalis OMERI02G31100 N 0.828
LPERR02G26580 Leersia perrieri LPERR02G26580 N 0.827
TRIUR3_24654 Triticum urartu TRIUR3_24654 N 0.801
F775_28442 Aegilops tauschii F775_28442 N 0.801
OS03G0232200 Oryza sativa OS03G0232200 I 0.702
ORGLA03G0090300 Oryza glaberrima ORGLA03G0090300 I 0.702
BRADI1G69207 Brachypodium distachyon BRADI1G69207 I 0.690
Traes_4DL_63ACC4A09 Triticum aestivum Traes_4DL_63ACC4A09 I 0.690
Traes_4AS_93BB8FB3E Triticum aestivum Traes_4AS_93BB8FB3E I 0.690
MLOC_10221 Hordeum vulgare MLOC_10221 I 0.690
OB03G19620 Oryza brachyantha OB03G19620 I 0.681
GSMUA_AchrUn_randomG23040_001 Musa acuminata GSMUA_AchrUn_randomG23040_001 I 0.679
Traes_4BL_D4491E3AB Triticum aestivum Traes_4BL_D4491E3AB I 0.679