Pavir.Da01893 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Da01893 T009407_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01893.1.p AP2 52 103

Links

Other AP2 family TFs
Other Panicum virgatum TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.703
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.703
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.703
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.703
SapurV1A.0144s0020 Salix purpurea SapurV1A.0144s0020 N 0.702
Gorai.010G236100 Gossypium raimondii Gorai.010G236100 I 0.702
OPUNC09G09870 Oryza punctata OPUNC09G09870 I 0.697
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I 0.697
ONIVA09G11170 Oryza nivara ONIVA09G11170 I 0.697
OLONG_007389 Oryza longistaminata OLONG_007389 I 0.697
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I 0.697
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I 0.697
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I 0.697
Sb02g025530 Sorghum bicolor Sb02g025530 I 0.697
OBART09G11390 Oryza barthii OBART09G11390 I 0.697
OS09G0434500 Oryza sativa OS09G0434500 I 0.697
Pavir.J01991 Panicum virgatum Pavir.J01991 I 0.697
Si030088m.g Setaria italica Si030088m.g I 0.697
OMERI09G08870 Oryza meridionalis OMERI09G08870 I 0.697
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I 0.697
BGIOSGA030816 Oryza indica BGIOSGA030816 I 0.697
OB09G17960 Oryza brachyantha OB09G17960 I 0.697
LPERR09G08060 Leersia perrieri LPERR09G08060 I 0.697
mgf010035m Mimulus guttatus mgf010035m I 0.695
mgf009667m Mimulus guttatus mgf009667m I 0.695
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.694
GRMZM2G018398 Zea mays GRMZM2G018398 I 0.688
Pavir.Aa00281 Panicum virgatum Pavir.Aa00281 I 0.688
GSMUA_Achr2G07300_001 Musa acuminata GSMUA_Achr2G07300_001 I 0.688
Si017568m.g Setaria italica Si017568m.g I 0.688
ONIVA06G06990 Oryza nivara ONIVA06G06990 I 0.688
Pavir.J04875 Panicum virgatum Pavir.J04875 I 0.688
Cla022096 Citrullus lanatus Cla022096 I 0.687
PK15234.1 Cannabis sativa PK15234.1 I 0.684
cassava31610.valid.m1 Manihot esculenta cassava31610.valid.m1 I 0.683
cassava31609.valid.m1 Manihot esculenta cassava31609.valid.m1 I 0.683
Cucsa.359880 Cucumis sativus Cucsa.359880 I 0.683
27585.m000144 Ricinus communis 27585.m000144 I 0.683
Aquca_020_00575 Aquilegia coerulea Aquca_020_00575 I 0.683
Lus10013186.g Linum usitatissimum Lus10013186.g I 0.683
Eucgr.I02155 Eucalyptus grandis Eucgr.I02155 I 0.683
Lus10037448.g Linum usitatissimum Lus10037448.g I 0.683
evm.TU.supercontig_481.1 Carica papaya evm.TU.supercontig_481.1 I 0.683
gene05448-v1.0-hybrid Fragaria vesca gene05448-v1.0-hybrid I 0.683
Gorai.011G056300 Gossypium raimondii Gorai.011G056300 I 0.683
GSMUA_Achr9G18090_001 Musa acuminata GSMUA_Achr9G18090_001 I 0.683
MTR_2g105380 Medicago truncatula MTR_2g105380 I 0.683
SapurV1A.1700s0030 Salix purpurea SapurV1A.1700s0030 I 0.683
GSMUA_Achr3G10140_001 Musa acuminata GSMUA_Achr3G10140_001 I 0.683
GLYMA03G42450 Glycine max GLYMA03G42450 I 0.683
GLYMA19G45200 Glycine max GLYMA19G45200 I 0.683
MTR_8g022820 Medicago truncatula MTR_8g022820 I 0.683
POPTR_0001s16400 Populus trichocarpa POPTR_0001s16400 I 0.683
Ca_16180 Cicer arietinum Ca_16180 I 0.683
MDP0000308922 Malus domestica MDP0000308922 I 0.683
VIT_09s0002g00470 Vitis vinifera VIT_09s0002g00470 I 0.683
MDP0000403580 Malus domestica MDP0000403580 I 0.683
TCM_029232 Theobroma cacao TCM_029232 I 0.683
Cla015763 Citrullus lanatus Cla015763 I 0.683
POPTR_0008s23260 Populus trichocarpa POPTR_0008s23260 N 0.682
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I 0.681
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I 0.681
MLOC_38561 Hordeum vulgare MLOC_38561 I 0.681
GSMUA_Achr6G10870_001 Musa acuminata GSMUA_Achr6G10870_001 I 0.681
F775_30714 Aegilops tauschii F775_30714 I 0.681
AMTR_s00129p00119770 Amborella trichopoda AMTR_s00129p00119770 I 0.681
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I 0.681
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.681
TRIUR3_20682 Triticum urartu TRIUR3_20682 I 0.681
Cla008128 Citrullus lanatus Cla008128 I 0.681
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.680
mgf005222m Mimulus guttatus mgf005222m I 0.679
MLOC_69925 Hordeum vulgare MLOC_69925 I 0.679
GRMZM2G052667 Zea mays GRMZM2G052667 I 0.677