Pavir.Fa00114 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Fa00114 T009434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00114.1.p AP2 41 94

Links

Other AP2 family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.830
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.830
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.824
OGLUM08G23770 Oryza glumaepatula OGLUM08G23770 N 0.775
BGIOSGA026544 Oryza indica BGIOSGA026544 N 0.775
ORGLA08G0220200 Oryza glaberrima ORGLA08G0220200 N 0.775
BGIOSGA026545 Oryza indica BGIOSGA026545 N 0.768
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.744
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.742
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.725
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.723
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.721
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.718
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.716
Si031001m.g Setaria italica Si031001m.g I 0.713
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.713
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.713
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.711
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.704
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.704
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.702
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.701
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.701
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.697
DREB1B Oryza indica BGIOSGA029417 N 0.697
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.697
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.697
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.697
DREB1H Oryza indica BGIOSGA029416 I 0.695
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.695
OGLUM09G17420 Oryza glumaepatula OGLUM09G17420 I 0.695
DREB1H Oryza sativa OS09G0522100 I 0.695
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.695
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.695
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.692
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.687
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.683
BRADI4G35580 Brachypodium distachyon BRADI4G35580 I 0.681