Pavir.Gb00885 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Gb00885 T009479_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00885.1.p AP2 16 66

Links

Other AP2 family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si011086m.g Setaria italica Si011086m.g N 0.744
Pavir.Ga01110 Panicum virgatum Pavir.Ga01110 N 0.732
GRMZM2G368838 Zea mays GRMZM2G368838 N 0.732
Sb06g025890 Sorghum bicolor Sb06g025890 N 0.723
Pavir.Ga00932 Panicum virgatum Pavir.Ga00932 N 0.720
OPUNC04G19950 Oryza punctata OPUNC04G19950 N 0.709
OGLUM04G22250 Oryza glumaepatula OGLUM04G22250 N 0.702
OBART04G22210 Oryza barthii OBART04G22210 N 0.702
ONIVA04G20830 Oryza nivara ONIVA04G20830 N 0.702
OMERI04G18760 Oryza meridionalis OMERI04G18760 N 0.702
BGIOSGA016949 Oryza indica BGIOSGA016949 N 0.702
OS04G0572200 Oryza sativa OS04G0572200 N 0.702
ORUFI04G23880 Oryza rufipogon ORUFI04G23880 N 0.702
LPERR04G18180 Leersia perrieri LPERR04G18180 N 0.694
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.681