CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J37967
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J37967
T009648_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.767
0.918
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.727
0.857
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.695
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J37967.1.p
AP2
132
183
CAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTAVEAAHAYDEAAKAMYGA
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy