CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0034s0630
(
Salix purpurea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
SapurV1A.0034s0630
T009682_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.803
0.922
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.748
0.824
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.748
0.824
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0034s0630.1.p
AP2
5
56
KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGR
SapurV1A.0034s0630.2.p
AP2
5
56
KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGR
Links
Other
AP2
family TFs
Other
Salix purpurea
TFs
300 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028630
Oryza indica
BGIOSGA028630
N
0.000
Pavir.Fb01201
Panicum virgatum
Pavir.Fb01201
N
0.000
Pavir.Ba02946
Panicum virgatum
Pavir.Ba02946
N
0.000
Si030262m.g
Setaria italica
Si030262m.g
N
0.000
Sb07g019940
Sorghum bicolor
Sb07g019940
N
0.000
OS08G0402100
Oryza sativa
OS08G0402100
N
0.000
ORUFI08G15760
Oryza rufipogon
ORUFI08G15760
N
0.000
ORGLA08G0122300
Oryza glaberrima
ORGLA08G0122300
N
0.000
OPUNC08G12580
Oryza punctata
OPUNC08G12580
N
0.000
ONIVA08G14880
Oryza nivara
ONIVA08G14880
N
0.000
OGLUM08G14700
Oryza glumaepatula
OGLUM08G14700
N
0.000
OBART08G13930
Oryza barthii
OBART08G13930
N
0.000
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
0.000
BRADI3G35280
Brachypodium distachyon
BRADI3G35280
N
0.000
Pavir.J19395
Panicum virgatum
Pavir.J19395
N
0.000