CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0166s0150
(
Salix purpurea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
SapurV1A.0166s0150
T009725_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.917
0.962
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.917
0.962
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.869
0.895
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.869
0.895
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.851
0.886
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.851
0.886
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.846
0.876
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.846
0.876
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0166s0150.1.p
AP2
220
280
SIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGP
SapurV1A.0166s0150.1.p
AP2
322
374
SIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGL
SapurV1A.0166s0150.2.p
AP2
220
280
SIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGP
SapurV1A.0166s0150.2.p
AP2
322
357
SIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFGKC
SapurV1A.0166s0150.3.p
AP2
220
252
SIYRGVTRHRWTGRYEAHLWDNSCRREGQARKG
Links
Other
AP2
family TFs
Other
Salix purpurea
TFs
596 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy