CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0233s0380
(
Salix purpurea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
SapurV1A.0233s0380
T009739_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC
GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.736
0.776
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.708
0.776
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.708
0.776
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.708
0.776
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.685
0.653
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.684
0.714
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.684
0.714
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.684
0.714
OS05G0497200
M01636_2.00
Oryza sativa
CGSCGCCR
YGGCGSCG
PBM
Weirauch et al.(2014)
pTH8640
0.680
0.653
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0233s0380.1.p
AP2
20
72
NEYRGIRRRPWGKFAAEIRDPTKNGARRWLGTYDTAEEAARAYDRAAFAFRGH
Links
Other
AP2
family TFs
Other
Salix purpurea
TFs
370 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy