SapurV1A.0711s0020 (Salix purpurea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 SapurV1A.0711s0020 T009796_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.685 0.714
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.685 0.714
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.685 0.714
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.677 0.694
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0711s0020.1.p AP2 119 170

Links

Other AP2 family TFs
Other Salix purpurea TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s11080 Populus trichocarpa POPTR_0007s11080 I 0.762
GLYMA05G32040 Glycine max GLYMA05G32040 I 0.719
MTR_8g092460 Medicago truncatula MTR_8g092460 I 0.715
chr4.CM0227.40.nd Lotus japonicus chr4.CM0227.40.nd I 0.715
Ca_09638 Cicer arietinum Ca_09638 I 0.707
GLYMA08G15350 Glycine max GLYMA08G15350 I 0.699
LPERR08G14810 Leersia perrieri LPERR08G14810 I 0.698
SELMODRAFT_28277 Selaginella moellendorffii SELMODRAFT_28277 I 0.694
SELMODRAFT_131245 Selaginella moellendorffii SELMODRAFT_131245 I 0.694
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.691
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.691
29801.m003186 Ricinus communis 29801.m003186 I 0.687
GLYMA07G33511 Glycine max GLYMA07G33511 I 0.686
Carubv10007825m.g Capsella rubella Carubv10007825m.g I 0.685
Bostr.7867s1298 Boechera stricta Bostr.7867s1298 I 0.685
Cagra.6777s0012 Capsella grandiflora Cagra.6777s0012 I 0.685
Bo1g007330 Brassica oleracea Bo1g007330 I 0.685
ERF109 Arabidopsis thaliana AT4G34410 D 0.685
Thhalv10027524m.g Eutrema salsugineum Thhalv10027524m.g I 0.685
Bra011529 Brassica rapa Bra011529 I 0.685
RRTF1 Arabidopsis lyrata scaffold_700692.1 I 0.685
Bo7g116860 Brassica oleracea Bo7g116860 I 0.685
MDP0000175375 Malus domestica MDP0000175375 I 0.684
BRADI3G58015 Brachypodium distachyon BRADI3G58015 I 0.684
Gorai.003G048800 Gossypium raimondii Gorai.003G048800 I 0.682
Si018144m.g Setaria italica Si018144m.g I 0.680
Traes_5BL_F5D379AFC Triticum aestivum Traes_5BL_F5D379AFC I 0.680
PK15705.1 Cannabis sativa PK15705.1 I 0.679
Bra034624 Brassica rapa Bra034624 I 0.678
chr1.LjT14I13.10.nd Lotus japonicus chr1.LjT14I13.10.nd I 0.677
A4F248_TOBAC Nicotiana tabacum A4F248_TOBAC D 0.677
Ca_20968 Cicer arietinum Ca_20968 I 0.677
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.677
Pavir.J03216 Panicum virgatum Pavir.J03216 I 0.677
Pavir.J32690 Panicum virgatum Pavir.J32690 I 0.677