Thhalv10004742m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10004742m.g T009887_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.827 0.929
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.798 0.867
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.795 0.878
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.783 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004742m AP2 104 153
Thhalv10004742m AP2 196 247

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo7g064000 Brassica oleracea Bo7g064000 I 0.841
Bra012139 Brassica rapa Bra012139 I 0.841
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.837
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.837
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.837
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.837
TOE3 Arabidopsis thaliana AT5G67180 I 0.837
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.827
Cla000716 Citrullus lanatus Cla000716 I 0.827
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.827
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.827
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.827
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.827
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.827
Ca_09295 Cicer arietinum Ca_09295 I 0.827
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.827
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.827
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.827
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.827
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.827
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.827
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.827
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.827
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.827
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.827
Bo1g004960 Brassica oleracea Bo1g004960 I 0.827
Bo7g118400 Brassica oleracea Bo7g118400 I 0.827
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.827
AP2 Arabidopsis thaliana AT4G36920 I 0.827
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.827
PK02403.1 Cannabis sativa PK02403.1 I 0.827
Bra011741 Brassica rapa Bra011741 I 0.827
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.827
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.827
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.827
Bra017809 Brassica rapa Bra017809 I 0.827
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.827
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.826
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.826
mgf009315m Mimulus guttatus mgf009315m I 0.826
29805.m001494 Ricinus communis 29805.m001494 I 0.825
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.825
TCM_000665 Theobroma cacao TCM_000665 I 0.824
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.824
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.824
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.824
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.821
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.821
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.821
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.821
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.821
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.821
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.821
Si012635m.g Setaria italica Si012635m.g I 0.821
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.821
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.821
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.821
PK07183.1 Cannabis sativa PK07183.1 I 0.820
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.820
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.819
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.819
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.819
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.818
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.818
Pm002492 Prunus mume Pm002492 I 0.818
28752.m000339 Ricinus communis 28752.m000339 I 0.818
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.818
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.818
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.818
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.818
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.818
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.818
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.818
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.818
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.818
TCM_022077 Theobroma cacao TCM_022077 I 0.818
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.818
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.818
OS05G0121600 Oryza sativa OS05G0121600 I 0.818
Ca_02499 Cicer arietinum Ca_02499 I 0.818
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.818
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.818
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.818
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.818
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.818
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.818
Si025305m.g Setaria italica Si025305m.g I 0.818
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.818
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.818
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.818
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.818
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.818
MDP0000200319 Malus domestica MDP0000200319 I 0.818
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.818
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.818
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.818
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.816
TCM_042000 Theobroma cacao TCM_042000 I 0.816
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.816
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.816
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.816
F775_32962 Aegilops tauschii F775_32962 I 0.816
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.816
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.816
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.816
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.816
29169.m000017 Ricinus communis 29169.m000017 I 0.816
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.816
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.816
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.815
mgf021945m Mimulus guttatus mgf021945m I 0.815
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.815
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.815
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.815
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.814
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.813
MDP0000181606 Malus domestica MDP0000181606 I 0.813
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.813
Pm000974 Prunus mume Pm000974 I 0.813
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.813
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.812
Cla018124 Citrullus lanatus Cla018124 I 0.812
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.811
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.811
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.811
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.811
OB06G29960 Oryza brachyantha OB06G29960 I 0.811
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.811
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.811
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.810
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.810
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.810
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.810
Pm030172 Prunus mume Pm030172 I 0.810
MDP0000137561 Malus domestica MDP0000137561 I 0.810
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.810
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.809
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.809
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.807
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.807
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.807
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.806
Ca_14618 Cicer arietinum Ca_14618 I 0.806
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.802
Ca_12010 Cicer arietinum Ca_12010 I 0.802
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.801
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.801
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.800
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.800
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.800
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.800
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.800
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.800
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.800
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.800
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.799
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.798
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.798
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.797
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.797
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.796
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.796
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.796
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.796
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.795
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.795
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.795
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.795
Bra011939 Brassica rapa Bra011939 I 0.794
Bo4g070350 Brassica oleracea Bo4g070350 I 0.794
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.793
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.793
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.793
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.793
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.793
OS07G0235800 Oryza sativa OS07G0235800 I 0.793
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.793
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.793
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.793
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.793
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.793
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.793
OBART07G08110 Oryza barthii OBART07G08110 I 0.793
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.793
mgf010466m Mimulus guttatus mgf010466m I 0.792
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.792
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.792
OB03G45870 Oryza brachyantha OB03G45870 I 0.792
mgf005133m Mimulus guttatus mgf005133m I 0.792
Si029636m.g Setaria italica Si029636m.g I 0.792
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.792
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.792
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.792
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.792
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.791
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.791
Si036068m.g Setaria italica Si036068m.g I 0.790
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.790
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.790
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.790
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.790
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.790
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.790
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.789
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.789
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.789
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.787
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.786
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.786
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.786
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.785
MDP0000163645 Malus domestica MDP0000163645 I 0.784
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.783
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.783
P93632_MAIZE Zea mays P93632_MAIZE D 0.783
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.782
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.781
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.780
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.779
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.778
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.778
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.777
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.772
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.772
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.771
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.770
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.770
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.770
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.761
OS03G0818800 Oryza sativa OS03G0818800 I 0.758
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.753
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.753
Cla020549 Citrullus lanatus Cla020549 I 0.749
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.740
Cla018549 Citrullus lanatus Cla018549 I 0.735
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.684
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.680
evm.TU.supercontig_1.271 Carica papaya evm.TU.supercontig_1.271 N 0.678
Si006371m.g Setaria italica Si006371m.g I 0.678