Thhalv10009812m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10009812m.g T009915_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.819 0.960
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.819 0.960
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.809 0.960
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.809 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10009812m AP2 11 62

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra031069 Brassica rapa Bra031069 I 0.819
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.819
Bo8g102870 Brassica oleracea Bo8g102870 I 0.819
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.819
ERF018 Arabidopsis thaliana AT1G74930 D 0.819
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.816
TCM_037486 Theobroma cacao TCM_037486 I 0.814
mgf024162m Mimulus guttatus mgf024162m I 0.813
Bo6g086740 Brassica oleracea Bo6g086740 I 0.811
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.811
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.811
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.809
ERF017 Arabidopsis thaliana AT1G19210 D 0.809
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.809
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.809
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.808
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.808
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.808
mgf021940m Mimulus guttatus mgf021940m I 0.808
Bo6g119120 Brassica oleracea Bo6g119120 I 0.807
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.806
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.805
Bra003780 Brassica rapa Bra003780 I 0.804
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.803
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.803
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.802
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.802
Bra015882 Brassica rapa Bra015882 I 0.802
MDP0000704216 Malus domestica MDP0000704216 I 0.802
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.802
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.802
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.800
Pm027117 Prunus mume Pm027117 I 0.800
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.800
29739.m003716 Ricinus communis 29739.m003716 I 0.800
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.798
MDP0000649022 Malus domestica MDP0000649022 I 0.797
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.796
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.796
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.796
mgf025452m Mimulus guttatus mgf025452m I 0.795
Bo8g068370 Brassica oleracea Bo8g068370 I 0.795
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.795
Bra016518 Brassica rapa Bra016518 I 0.795
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.794
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.794
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.794
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.794
Ca_09124 Cicer arietinum Ca_09124 I 0.794
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.794
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.794
TCM_037415 Theobroma cacao TCM_037415 I 0.793
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.793
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.791
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.791
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.790
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.790
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.788
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.787
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.786
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.785
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.784
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.784
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.784
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.783
Bra025719 Brassica rapa Bra025719 I 0.783
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.780
Cla007584 Citrullus lanatus Cla007584 I 0.780
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.780
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.779
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.779
29739.m003647 Ricinus communis 29739.m003647 I 0.775
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.773
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.772
Cla011318 Citrullus lanatus Cla011318 I 0.772
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.772
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.771
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.770
Ca_01683 Cicer arietinum Ca_01683 I 0.770
Si019636m.g Setaria italica Si019636m.g I 0.770
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.769
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.769
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.768
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.765
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.764
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.764
Bo2g023630 Brassica oleracea Bo2g023630 I 0.762
Bra020162 Brassica rapa Bra020162 I 0.760
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.760
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.757
Ca_19297 Cicer arietinum Ca_19297 I 0.756
Ca_19295 Cicer arietinum Ca_19295 I 0.753
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.751
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.751
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.750
PK18548.1 Cannabis sativa PK18548.1 I 0.748
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.748
Bra006599 Brassica rapa Bra006599 I 0.747
Bo3g015600 Brassica oleracea Bo3g015600 I 0.747
Ca_19296 Cicer arietinum Ca_19296 I 0.747
Bo9g149820 Brassica oleracea Bo9g149820 I 0.745
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.745
Bra002377 Brassica rapa Bra002377 I 0.745
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.745
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.745
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.742
Si008104m.g Setaria italica Si008104m.g I 0.740
ERF016 Arabidopsis thaliana AT5G21960 I 0.739
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.739
Cla022291 Citrullus lanatus Cla022291 I 0.738
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.738
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.738
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.738
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.737
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.737
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.736
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.734
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.733
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.729
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.721
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.721
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.721
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.721
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.721
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.721
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.721
OS02G0781300 Oryza sativa OS02G0781300 I 0.721
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.719
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.718
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.713
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.701
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.695
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.695
OBART06G06190 Oryza barthii OBART06G06190 I 0.694
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.694
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.694
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.694
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.694
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.689
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.689
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.689
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.689
Si015027m.g Setaria italica Si015027m.g I 0.689
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.689
OB08G24280 Oryza brachyantha OB08G24280 I 0.689
OS08G0454000 Oryza sativa OS08G0454000 I 0.689
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.689
OBART08G16950 Oryza barthii OBART08G16950 I 0.689
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.689
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.689
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.689
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.688
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.684
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.683
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.681
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.681
F775_23111 Aegilops tauschii F775_23111 I 0.680