Thhalv10016913m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10016913m.g T009950_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.755 0.898
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.715 0.837
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.686 0.776
Q1ESI9_MAIZE
M09714_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB2A_02
0.685 0.816
DREB2C
M00846_2.00
Arabidopsis thaliana
NNRCCGNNN

NNNCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DREB2C
0.684 0.878
DREB2C
M01049_2.00
Arabidopsis thaliana
VRCCGVCW

WGBCGGYB
PBM
Sullivan et al.(2014)
pTH9747
0.684 0.878
DREB2C
M06611_2.00
Arabidopsis thaliana
DCCDCCRCCDHYDCCRCCDCM

KGHGGYGGHRDHGGYGGHGGH
Dap-seq
OMalley et al.(2016)
ERF48_col_a
0.684 0.878
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.680 0.796
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.680 0.796
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.680 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10016913m AP2 70 121

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK07402.1 Cannabis sativa PK07402.1 D 0.755
DREB2D Arabidopsis thaliana AT1G75490 D 0.680
DREB2C Arabidopsis thaliana AT2G40340 D 0.684
DREB2G Arabidopsis thaliana AT5G18450 D 0.686
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.715
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.685
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.687
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.758
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.692
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.682
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.683
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.767
30170.m014115 Ricinus communis 30170.m014115 I 0.683
29729.m002292 Ricinus communis 29729.m002292 I 0.755
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.704
mgf007881m Mimulus guttatus mgf007881m I 0.692
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.681
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.680
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.681
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.680
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.686
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.735
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.709
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.680
mgf024545m Mimulus guttatus mgf024545m I 0.688
mgf017629m Mimulus guttatus mgf017629m I 0.687
Pm018989 Prunus mume Pm018989 I 0.718
Pm015262 Prunus mume Pm015262 I 0.726
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.715
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.692
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.701
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.715
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.715
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.692
TCM_043302 Theobroma cacao TCM_043302 I 0.708
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.692
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.756
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.694
Ca_10770 Cicer arietinum Ca_10770 I 0.687
Pm006274 Prunus mume Pm006274 I 0.687
Pm003634 Prunus mume Pm003634 I 0.702
Cla021113 Citrullus lanatus Cla021113 I 0.686
Cla012194 Citrullus lanatus Cla012194 I 0.683
Cla006713 Citrullus lanatus Cla006713 I 0.752
Cla001755 Citrullus lanatus Cla001755 I 0.692
Ca_22585 Cicer arietinum Ca_22585 I 0.685
Ca_12446 Cicer arietinum Ca_12446 I 0.690
TCM_043306 Theobroma cacao TCM_043306 I 0.708
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.680
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.745
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.706
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.709
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.689
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.689
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.683
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.771
MDP0000880312 Malus domestica MDP0000880312 I 0.701
MDP0000446783 Malus domestica MDP0000446783 I 0.718
MDP0000290585 Malus domestica MDP0000290585 I 0.726
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.687
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.684
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.687
PK07829.1 Cannabis sativa PK07829.1 I 0.693
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.679
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.680
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.686
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.749
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.752
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.749
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.752
MDP0000250927 Malus domestica MDP0000250927 I 0.689
MDP0000250924 Malus domestica MDP0000250924 I 0.697
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.718
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.690
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.724
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.686
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.681
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.752
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.719
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.731
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.771
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.684
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.697
MDP0000165880 Malus domestica MDP0000165880 I 0.719
MDP0000153866 Malus domestica MDP0000153866 I 0.718
MDP0000147009 Malus domestica MDP0000147009 I 0.718
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.735
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.735
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.704
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.681
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.684
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.684
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.683
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.721
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.701
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.691
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.685
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.678
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.678
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.709
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.679
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.679
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.687
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.737
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.699
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.687
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.715
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.681
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.717
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.748
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.688
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.746
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.720
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.706
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.707
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.687
Bo9g177130 Brassica oleracea Bo9g177130 I 0.696
Bo9g155940 Brassica oleracea Bo9g155940 I 0.686
Bo6g119660 Brassica oleracea Bo6g119660 I 0.680
Bo6g086320 Brassica oleracea Bo6g086320 I 0.680
Bo4g190040 Brassica oleracea Bo4g190040 I 0.754
Bo2g083920 Brassica oleracea Bo2g083920 I 0.681
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.682
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.716
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.733
Bra002159 Brassica rapa Bra002159 I 0.686
Bra003752 Brassica rapa Bra003752 I 0.680
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.687
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.709
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.680
F775_32062 Aegilops tauschii F775_32062 I 0.692
F775_05774 Aegilops tauschii F775_05774 I 0.715
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.718
Bra017011 Brassica rapa Bra017011 I 0.754
Bra015840 Brassica rapa Bra015840 I 0.680
Bra008200 Brassica rapa Bra008200 I 0.681
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.690
TCM_043275 Theobroma cacao TCM_043275 I 0.724
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.703
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.679
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.711
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.726
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.718
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.767
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.758
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.681
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.691
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.687
TCM_034132 Theobroma cacao TCM_034132 I 0.679
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.719
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.684
Si022619m.g Setaria italica Si022619m.g I 0.683
Si002067m.g Setaria italica Si002067m.g I 0.711
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.698
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.698
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.686
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.755
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.680
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.682
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.682
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.716
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.682
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.716
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.682
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.716
OBART05G12580 Oryza barthii OBART05G12580 I 0.682
OBART01G04210 Oryza barthii OBART01G04210 I 0.716
OB01G13930 Oryza brachyantha OB01G13930 I 0.716
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.716
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.682
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.684
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.719
DREB2A Oryza sativa OS01G0165000 I 0.716
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.682
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.716
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.682
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.716
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.682
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.716
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.736