Thhalv10019659m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10019659m.g T009968_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.828 0.980
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.828 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019659m AP2 21 72

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.828
Bo2g072910 Brassica oleracea Bo2g072910 I 0.828
ERF021 Arabidopsis thaliana AT1G71450 D 0.828
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.828
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.828
Bra016136 Brassica rapa Bra016136 I 0.816
Bra007975 Brassica rapa Bra007975 I 0.813
Bo6g113020 Brassica oleracea Bo6g113020 I 0.808
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.805
Cla012665 Citrullus lanatus Cla012665 I 0.798
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.796
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.796
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.796
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.796
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.791
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.789
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.789
Bo6g094210 Brassica oleracea Bo6g094210 I 0.788
Bra003924 Brassica rapa Bra003924 I 0.788
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.787
Pm004269 Prunus mume Pm004269 I 0.787
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.784
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.784
MDP0000283350 Malus domestica MDP0000283350 I 0.784
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.779
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.779
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.779
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.774
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.773
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.772
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.770
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.769
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.769
28118.m000034 Ricinus communis 28118.m000034 I 0.760
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.755
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.751
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.751
TCM_036269 Theobroma cacao TCM_036269 I 0.750
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.748
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.747
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.746
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.745
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.744
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.743
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.742
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.741
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.737
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.734
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.734
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.733
TCM_036270 Theobroma cacao TCM_036270 I 0.732
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.726
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.722
Bra010210 Brassica rapa Bra010210 I 0.720
Bo8g027240 Brassica oleracea Bo8g027240 I 0.719
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.716
Bo5g086680 Brassica oleracea Bo5g086680 I 0.714
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.714
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.713
ERF022 Arabidopsis thaliana AT1G33760 I 0.713
Ca_15064 Cicer arietinum Ca_15064 I 0.713
Pm004272 Prunus mume Pm004272 I 0.713
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.711
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.711
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.710
27805.m000021 Ricinus communis 27805.m000021 I 0.709
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.707
MDP0000151428 Malus domestica MDP0000151428 I 0.701
MDP0000122740 Malus domestica MDP0000122740 I 0.701
Si026882m.g Setaria italica Si026882m.g I 0.701
MDP0000122739 Malus domestica MDP0000122739 I 0.701
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.701
Bra028009 Brassica rapa Bra028009 I 0.699
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.694
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.694
Cla012661 Citrullus lanatus Cla012661 I 0.694
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.694
Bo6g046850 Brassica oleracea Bo6g046850 I 0.693
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.693
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.692
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.692
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.692
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.692
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.689
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.687
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.687
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.686
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.686
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.686
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.686
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.683
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.683
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.681
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.681
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.681
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.681
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.681
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.681
OS11G0242300 Oryza sativa OS11G0242300 I 0.681
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.681
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.681
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.681
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.681
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.681
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.681
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.681
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.680
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.680
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.679
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.678
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.678