PK07402.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK07402.1 T010062_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00		 Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.743 0.878
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.704 0.796
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.702 0.837
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.700 0.837
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.700 0.837
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.700 0.837
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.687 0.857
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.687 0.857
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.681 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01097_2.00 AP2 51 102

DNA Binding Domains

Protein ID Domain From To Sequence
PK07402.1 AP2 75 126

Links

Other AP2 family TFs
Other Cannabis sativa TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.792
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.788
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.788
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.784
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.784
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.782
Cla006713 Citrullus lanatus Cla006713 I 0.781
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.780
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.776
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.773
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.773
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.773
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.769
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.769
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.767
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.767
29729.m002292 Ricinus communis 29729.m002292 I 0.766
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.765
Pm018989 Prunus mume Pm018989 I 0.761
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.761
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.758
MDP0000290585 Malus domestica MDP0000290585 I 0.757
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.756
Pm015262 Prunus mume Pm015262 I 0.756
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.755
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.754
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.753
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.753
MDP0000446783 Malus domestica MDP0000446783 I 0.753
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.753
MDP0000147009 Malus domestica MDP0000147009 I 0.753
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.751
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.751
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.751
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.751
OBART01G04210 Oryza barthii OBART01G04210 I 0.751
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.751
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.751
DREB2A Oryza sativa OS01G0165000 I 0.751
OB01G13930 Oryza brachyantha OB01G13930 I 0.751
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.751
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.751
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.749
MDP0000165880 Malus domestica MDP0000165880 I 0.747
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.747
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.743
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.743
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.743
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.743
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.743
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.743
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.743
F775_05774 Aegilops tauschii F775_05774 I 0.743
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.741
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.739
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.737
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.737
TCM_043306 Theobroma cacao TCM_043306 I 0.737
TCM_043302 Theobroma cacao TCM_043302 I 0.737
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.736
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.736
Si002067m.g Setaria italica Si002067m.g I 0.735
TCM_043275 Theobroma cacao TCM_043275 I 0.735
Bo4g190040 Brassica oleracea Bo4g190040 I 0.734
Bra017011 Brassica rapa Bra017011 I 0.734
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.732
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.731
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.729
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.729
Pm003634 Prunus mume Pm003634 I 0.728
Ca_12446 Cicer arietinum Ca_12446 I 0.727
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.727
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.724
mgf007881m Mimulus guttatus mgf007881m I 0.724
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.724
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.723
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.722
Cla001755 Citrullus lanatus Cla001755 I 0.722
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.720
MDP0000153866 Malus domestica MDP0000153866 I 0.719
PK07829.1 Cannabis sativa PK07829.1 I 0.719
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.718
MDP0000880312 Malus domestica MDP0000880312 I 0.718
mgf017629m Mimulus guttatus mgf017629m I 0.717
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.715
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.714
TCM_026121 Theobroma cacao TCM_026121 I 0.714
Bo9g177130 Brassica oleracea Bo9g177130 I 0.714
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.714
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.714
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.713
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.712
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.712
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.712
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.712
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.711
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.710
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.710
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.709
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.707
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.707
Si022619m.g Setaria italica Si022619m.g I 0.706
Cla012194 Citrullus lanatus Cla012194 I 0.706
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.705
Bo9g155940 Brassica oleracea Bo9g155940 I 0.704
Bra002159 Brassica rapa Bra002159 I 0.704
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.704
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.704
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.704
DREB2G Arabidopsis thaliana AT5G18450 D 0.704
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.704
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.703
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.703
F775_32062 Aegilops tauschii F775_32062 I 0.702
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.702
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.702
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.702
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.702
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.702
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.701
Bo6g086320 Brassica oleracea Bo6g086320 I 0.700
DREB2D Arabidopsis thaliana AT1G75490 D 0.700
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.700
Bra015840 Brassica rapa Bra015840 I 0.700
Bo6g119660 Brassica oleracea Bo6g119660 I 0.700
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.700
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.700
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.700
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.700
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.700
Bra003752 Brassica rapa Bra003752 I 0.700
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.700
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.700
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.699
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.699
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.699
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.699
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.698
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.698
mgf024545m Mimulus guttatus mgf024545m I 0.698
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.698
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.696
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.695
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.694
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.694
30170.m014115 Ricinus communis 30170.m014115 I 0.694
Ca_22585 Cicer arietinum Ca_22585 I 0.694
MDP0000250927 Malus domestica MDP0000250927 I 0.694
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.694
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.694
Bra028759 Brassica rapa Bra028759 I 0.693
Bo2g006960 Brassica oleracea Bo2g006960 I 0.693
Bo2g083920 Brassica oleracea Bo2g083920 I 0.692
MDP0000250924 Malus domestica MDP0000250924 I 0.692
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.692
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.692
Bra008200 Brassica rapa Bra008200 I 0.692
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.691
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.690
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.690
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.689
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.688
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.688
Pm006274 Prunus mume Pm006274 I 0.688
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.688
Ca_10770 Cicer arietinum Ca_10770 I 0.688
Cla021113 Citrullus lanatus Cla021113 I 0.688
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.688
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.688
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.688
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.687
DREB2A Arabidopsis thaliana AT5G05410 D 0.687
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.686
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.685
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.685
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.685
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.685
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.685
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.685
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.685
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.684
Bra023674 Brassica rapa Bra023674 I 0.684
DREB2E Oryza sativa OS03G0174400 I 0.684
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.684
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.684
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.684
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.684
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.684
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.684
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.684
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.684
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.684
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.684
Bra005852 Brassica rapa Bra005852 I 0.684
MDP0000295902 Malus domestica MDP0000295902 I 0.684
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.684
MDP0000141335 Malus domestica MDP0000141335 I 0.684
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.684
Bo2g016490 Brassica oleracea Bo2g016490 I 0.684
OBART03G05550 Oryza barthii OBART03G05550 I 0.684
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.684
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.684
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.684
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.684
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.684
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.683
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.683
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.683
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.682
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.682
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.682
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.682
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.682
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.682
POPTR_0016s13380 Populus trichocarpa POPTR_0016s13380 I 0.682
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.682
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.682
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.681
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.681
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.681
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.681
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.681
TCM_024756 Theobroma cacao TCM_024756 I 0.681
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.681
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.681
27810.m000639 Ricinus communis 27810.m000639 I 0.681
29680.m001737 Ricinus communis 29680.m001737 I 0.681
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.681
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.681
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.681
PK08602.1 Cannabis sativa PK08602.1 D 0.681
Ca_07264 Cicer arietinum Ca_07264 I 0.681
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.681
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.681
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.681
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.680
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.680
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.680
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.680
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.680
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.680
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.680
TCM_034132 Theobroma cacao TCM_034132 I 0.679
Ca_14133 Cicer arietinum Ca_14133 I 0.679
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.679
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.679
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.678
MTR_0939s0010 Medicago truncatula MTR_0939s0010 I 0.678
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.678
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.678
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.677
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.677
Bo1g141310 Brassica oleracea Bo1g141310 I 0.677
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.677