PK09586.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK09586.1 T010067_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.757 0.820
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.750 0.820
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.750 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK09586.1 AP2 133 184

Links

Other AP2 family TFs
Other Cannabis sativa TFs

424 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.000
BGLB007768 Biomphalaria glabrata BGLB007768 N 0.000
Bo1g131210 Brassica oleracea Bo1g131210 N 0.000
BRADI3G23370 Brachypodium distachyon BRADI3G23370 N 0.000
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.000
cassava13400.valid.m1 Manihot esculenta cassava13400.valid.m1 N 0.000
Ca_08015 Cicer arietinum Ca_08015 N 0.000
ENSPSIG00000004928 Pelodiscus sinensis ENSPSIG00000004928 N 0.000
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.000
F775_10961 Aegilops tauschii F775_10961 N 0.000
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.000
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.000
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.000
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.000
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.000
HelroG92822 Helobdella robusta HelroG92822 N 0.000
HHAL009617-PA Halyomorpha halys HHAL009617-PA N 0.000
HOXB3 Meleagris gallopavo ENSMGAG00000002541 N 0.000
HOXC13 Dasypus novemcinctus ENSDNOG00000048301 N 0.000
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.000
M407DRAFT_77617 Tulasnella calospora M407DRAFT_77617 N 0.000
MDP0000690933 Malus domestica MDP0000690933 N 0.000
mgf006959m Mimulus guttatus mgf006959m N 0.000
NEMVEDRAFT_v1g150519 Nematostella vectensis NEMVEDRAFT_v1g150519 N 0.000
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.000
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.000
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.000
ORUFI09G21220 Oryza rufipogon ORUFI09G21220 N 0.000
OS01G0788800 Oryza sativa OS01G0788800 N 0.000
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.000
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.000
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.000
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.000
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.000
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.000
Tal_R011355 Tyto alba Tal_R011355 N 0.000
TCM_016582 Theobroma cacao TCM_016582 I 0.000
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.000
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.000
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.000