CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK14490.1
(
Cannabis sativa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
PK14490.1
T010079_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.689
0.886
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.689
0.886
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK14490.1
AP2
171
220
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
PK14490.1
AP2
263
294
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAI
Links
Other
AP2
family TFs
Other
Cannabis sativa
TFs
181 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc11g072600.1
Solanum lycopersicum
Solyc11g072600.1
I
0.735
Ciclev10031306m.g
Citrus clementina
Ciclev10031306m.g
I
0.713
cassava42433.valid.m1
Manihot esculenta
cassava42433.valid.m1
N
0.711
Eucgr.B02453
Eucalyptus grandis
Eucgr.B02453
I
0.709
Gorai.009G104200
Gossypium raimondii
Gorai.009G104200
I
0.708
SapurV1A.0038s0220
Salix purpurea
SapurV1A.0038s0220
I
0.702
RAP2.7
Arabidopsis thaliana
AT2G28550
D
0.698
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.698
Gorai.004G002100
Gossypium raimondii
Gorai.004G002100
I
0.698
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.697
Ca_09295
Cicer arietinum
Ca_09295
I
0.689
Cla000716
Citrullus lanatus
Cla000716
I
0.689
VIT_13s0019g03550
Vitis vinifera
VIT_13s0019g03550
I
0.689
Ca_14618
Cicer arietinum
Ca_14618
I
0.689
Ca_12010
Cicer arietinum
Ca_12010
I
0.689
Ca_02499
Cicer arietinum
Ca_02499
I
0.689
Pm002492
Prunus mume
Pm002492
I
0.689
29805.m001494
Ricinus communis
29805.m001494
I
0.689
cassava13566.valid.m1
Manihot esculenta
cassava13566.valid.m1
I
0.689
cassava24954.valid.m1
Manihot esculenta
cassava24954.valid.m1
I
0.689
Cucsa.102550
Cucumis sativus
Cucsa.102550
I
0.689
28752.m000339
Ricinus communis
28752.m000339
I
0.689
Q9XHD4_PETHY
Petunia x hybrida
Q9XHD4_PETHY
D
0.689
Cla020549
Citrullus lanatus
Cla020549
I
0.689
VIT_08s0040g03180
Vitis vinifera
VIT_08s0040g03180
I
0.689
Pm030172
Prunus mume
Pm030172
I
0.689
Cla018124
Citrullus lanatus
Cla018124
I
0.689
Traes_1DS_2BB06F54C
Triticum aestivum
Traes_1DS_2BB06F54C
I
0.689
Si029636m.g
Setaria italica
Si029636m.g
I
0.689
Si036068m.g
Setaria italica
Si036068m.g
I
0.689
Solyc02g064960.2
Solanum lycopersicum
Solyc02g064960.2
I
0.689
Si025305m.g
Setaria italica
Si025305m.g
I
0.689
AMTR_s00035p00205430
Amborella trichopoda
AMTR_s00035p00205430
I
0.689
Sb01g003400
Sorghum bicolor
Sb01g003400
I
0.689
Sb02g007000
Sorghum bicolor
Sb02g007000
I
0.689
Sb06g030670
Sorghum bicolor
Sb06g030670
I
0.689
Solyc02g093150.2
Solanum lycopersicum
Solyc02g093150.2
I
0.689
Solyc03g044300.2
Solanum lycopersicum
Solyc03g044300.2
I
0.689
Traes_1BS_E68807072
Triticum aestivum
Traes_1BS_E68807072
I
0.689
Cucsa.307230
Cucumis sativus
Cucsa.307230
I
0.689
RAP2.7
Vitis vinifera
VIT_06s0004g03590
I
0.689
Traes_1AS_90F3120F8
Triticum aestivum
Traes_1AS_90F3120F8
I
0.689
TCM_042000
Theobroma cacao
TCM_042000
I
0.689
Solyc10g084340.1
Solanum lycopersicum
Solyc10g084340.1
I
0.689
TCM_000665
Theobroma cacao
TCM_000665
I
0.689
TCM_022077
Theobroma cacao
TCM_022077
I
0.689
TOE3
Vitis vinifera
VIT_07s0031g00220
I
0.689
Aquca_010_00628
Aquilegia coerulea
Aquca_010_00628
I
0.689
Pavir.Ba03394
Panicum virgatum
Pavir.Ba03394
I
0.689
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
0.689
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
0.689
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.689
MDP0000200319
Malus domestica
MDP0000200319
I
0.689
Gorai.008G077800
Gossypium raimondii
Gorai.008G077800
I
0.689
Lus10023165.g
Linum usitatissimum
Lus10023165.g
I
0.689
MDP0000137561
Malus domestica
MDP0000137561
I
0.689
Pavir.J23520
Panicum virgatum
Pavir.J23520
I
0.689
Pavir.J41060
Panicum virgatum
Pavir.J41060
I
0.689
LjSGA_005424.1
Lotus japonicus
LjSGA_005424.1
I
0.689
LjT39B13.80.nc
Lotus japonicus
LjT39B13.80.nc
I
0.689
PDK_20s1506731g001
Phoenix dactylifera
PDK_20s1506731g001
I
0.689
chr3.LjT05P05.30.nd
Lotus japonicus
chr3.LjT05P05.30.nd
I
0.689
PK02403.1
Cannabis sativa
PK02403.1
I
0.689
SapurV1A.0689s0070
Salix purpurea
SapurV1A.0689s0070
I
0.689
SapurV1A.1340s0010
Salix purpurea
SapurV1A.1340s0010
I
0.689
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.689
Gorai.007G215900
Gossypium raimondii
Gorai.007G215900
I
0.689
Gorai.003G025900
Gossypium raimondii
Gorai.003G025900
I
0.689
Bostr.7867s1579
Boechera stricta
Bostr.7867s1579
I
0.689
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
0.689
Cagra.4909s0048
Capsella grandiflora
Cagra.4909s0048
I
0.689
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
0.689
PRUPE_ppa005230mg
Prunus persica
PRUPE_ppa005230mg
I
0.689
mgf009315m
Mimulus guttatus
mgf009315m
I
0.689
mgf021945m
Mimulus guttatus
mgf021945m
I
0.689
Aquca_007_00714
Aquilegia coerulea
Aquca_007_00714
I
0.689
Carubv10004818m.g
Capsella rubella
Carubv10004818m.g
I
0.689
Carubv10025387m.g
Capsella rubella
Carubv10025387m.g
I
0.689
evm.TU.supercontig_55.116
Carica papaya
evm.TU.supercontig_55.116
I
0.689
gene23876-v1.0-hybrid
Fragaria vesca
gene23876-v1.0-hybrid
I
0.689
Gorai.002G251500
Gossypium raimondii
Gorai.002G251500
I
0.689
evm.TU.supercontig_139.43
Carica papaya
evm.TU.supercontig_139.43
I
0.689
Eucgr.J02113
Eucalyptus grandis
Eucgr.J02113
I
0.689
Ciclev10028259m.g
Citrus clementina
Ciclev10028259m.g
I
0.689
Eucgr.I00892
Eucalyptus grandis
Eucgr.I00892
I
0.689
Cucsa.367290
Cucumis sativus
Cucsa.367290
I
0.689
Si012635m.g
Setaria italica
Si012635m.g
I
0.689
GRMZM5G862109
Zea mays
GRMZM5G862109
I
0.689
GSMUA_Achr10G03230_001
Musa acuminata
GSMUA_Achr10G03230_001
I
0.689
GSMUA_Achr1G09830_001
Musa acuminata
GSMUA_Achr1G09830_001
I
0.689
GSMUA_Achr1G26080_001
Musa acuminata
GSMUA_Achr1G26080_001
I
0.689
GRMZM2G416701
Zea mays
GRMZM2G416701
I
0.689
GRMZM2G176175
Zea mays
GRMZM2G176175
I
0.689
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.689
GLYMA17G18640
Glycine max
GLYMA17G18640
I
0.689
GRMZM2G174784
Zea mays
GRMZM2G174784
I
0.689
GSMUA_Achr3G13180_001
Musa acuminata
GSMUA_Achr3G13180_001
I
0.689
GSMUA_Achr5G29290_001
Musa acuminata
GSMUA_Achr5G29290_001
I
0.689
PRUPE_ppa003783mg
Prunus persica
PRUPE_ppa003783mg
I
0.689
MLOC_43575
Hordeum vulgare
MLOC_43575
I
0.689
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.689
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
0.689
GSMUA_AchrUn_randomG10320_001
Musa acuminata
GSMUA_AchrUn_randomG10320_001
I
0.689
GSMUA_Achr9G03060_001
Musa acuminata
GSMUA_Achr9G03060_001
I
0.689
GSMUA_Achr6G33140_001
Musa acuminata
GSMUA_Achr6G33140_001
I
0.689
GSMUA_Achr6G34420_001
Musa acuminata
GSMUA_Achr6G34420_001
I
0.689
GSMUA_Achr8G18550_001
Musa acuminata
GSMUA_Achr8G18550_001
I
0.689
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.689
GLYMA11G15650
Glycine max
GLYMA11G15650
I
0.689
Bo1g004960
Brassica oleracea
Bo1g004960
I
0.689
Bo4g070350
Brassica oleracea
Bo4g070350
I
0.689
Bo7g118400
Brassica oleracea
Bo7g118400
I
0.689
Bra011741
Brassica rapa
Bra011741
I
0.689
BGIOSGA025426
Oryza indica
BGIOSGA025426
I
0.689
BGIOSGA018911
Oryza indica
BGIOSGA018911
I
0.689
AP2
Arabidopsis thaliana
AT4G36920
I
0.689
BGIOSGA013826
Oryza indica
BGIOSGA013826
I
0.689
BGIOSGA017250
Oryza indica
BGIOSGA017250
I
0.689
Bra011939
Brassica rapa
Bra011939
I
0.689
Bra017809
Brassica rapa
Bra017809
I
0.689
GLYMA01G39520
Glycine max
GLYMA01G39520
I
0.689
GLYMA03G33470
Glycine max
GLYMA03G33470
I
0.689
GLYMA05G18041
Glycine max
GLYMA05G18041
I
0.689
AP2
Arabidopsis lyrata
fgenesh2_kg.7__332__AT4G36920.1
I
0.689
F775_32962
Aegilops tauschii
F775_32962
I
0.689
BRADI1G53650
Brachypodium distachyon
BRADI1G53650
I
0.689
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.689
BRADI5G24100
Brachypodium distachyon
BRADI5G24100
I
0.689
MTR_4g094868
Medicago truncatula
MTR_4g094868
I
0.689
GSMUA_AchrUn_randomG16200_001
Musa acuminata
GSMUA_AchrUn_randomG16200_001
I
0.689
ORUFI03G40640
Oryza rufipogon
ORUFI03G40640
I
0.689
ORUFI04G29120
Oryza rufipogon
ORUFI04G29120
I
0.689
ORUFI07G08180
Oryza rufipogon
ORUFI07G08180
I
0.689
OS03G0818800
Oryza sativa
OS03G0818800
I
0.689
ORGLA07G0068600
Oryza glaberrima
ORGLA07G0068600
I
0.689
ORGLA05G0015400
Oryza glaberrima
ORGLA05G0015400
I
0.689
OPUNC04G24930
Oryza punctata
OPUNC04G24930
I
0.689
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
0.689
MTR_5g016810
Medicago truncatula
MTR_5g016810
I
0.689
ORGLA04G0237800
Oryza glaberrima
ORGLA04G0237800
I
0.689
OS05G0121600
Oryza sativa
OS05G0121600
I
0.689
OS07G0235800
Oryza sativa
OS07G0235800
I
0.689
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
0.689
POPTR_0005s18400
Populus trichocarpa
POPTR_0005s18400
I
0.689
POPTR_0007s10780
Populus trichocarpa
POPTR_0007s10780
I
0.689
POPTR_0016s08530
Populus trichocarpa
POPTR_0016s08530
I
0.689
PGSC0003DMG400025479
Solanum tuberosum
PGSC0003DMG400025479
I
0.689
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.689
PGSC0003DMG400004006
Solanum tuberosum
PGSC0003DMG400004006
I
0.689
PGSC0003DMG400006482
Solanum tuberosum
PGSC0003DMG400006482
I
0.689
PGSC0003DMG400011046
Solanum tuberosum
PGSC0003DMG400011046
I
0.689
OPUNC03G36030
Oryza punctata
OPUNC03G36030
I
0.689
OPUNC07G07690
Oryza punctata
OPUNC07G07690
I
0.689
OMERI03G35820
Oryza meridionalis
OMERI03G35820
I
0.689
OBART07G08110
Oryza barthii
OBART07G08110
I
0.689
ONIVA04G25920
Oryza nivara
ONIVA04G25920
I
0.689
OLONG_021321
Oryza longistaminata
OLONG_021321
I
0.689
OGLUM04G27380
Oryza glumaepatula
OGLUM04G27380
I
0.689
OGLUM07G07330
Oryza glumaepatula
OGLUM07G07330
I
0.689
OGLUM03G38790
Oryza glumaepatula
OGLUM03G38790
I
0.689
OMERI04G22900
Oryza meridionalis
OMERI04G22900
I
0.689
ONIVA03G25220
Oryza nivara
ONIVA03G25220
I
0.689
OMERI07G06850
Oryza meridionalis
OMERI07G06850
I
0.689
ONIVA03G40610
Oryza nivara
ONIVA03G40610
I
0.689
MTR_7g100590
Medicago truncatula
MTR_7g100590
I
0.689
PK07183.1
Cannabis sativa
PK07183.1
I
0.688
POPTR_0006s13460
Populus trichocarpa
POPTR_0006s13460
I
0.688
evm.TU.supercontig_114.55
Carica papaya
evm.TU.supercontig_114.55
I
0.686
MDP0000181606
Malus domestica
MDP0000181606
I
0.685
Pm000974
Prunus mume
Pm000974
I
0.685
GRMZM2G700665
Zea mays
GRMZM2G700665
I
0.685
chr1.CM0033.300.nc
Lotus japonicus
chr1.CM0033.300.nc
I
0.685
GSMUA_Achr3G28340_001
Musa acuminata
GSMUA_Achr3G28340_001
I
0.684
GSMUA_Achr4G06100_001
Musa acuminata
GSMUA_Achr4G06100_001
I
0.683
OB03G45870
Oryza brachyantha
OB03G45870
I
0.681
Lus10019331.g
Linum usitatissimum
Lus10019331.g
I
0.679
cassava12358.valid.m1
Manihot esculenta
cassava12358.valid.m1
I
0.679
29169.m000017
Ricinus communis
29169.m000017
I
0.679
Lus10009374.g
Linum usitatissimum
Lus10009374.g
I
0.679
TCM_043051
Theobroma cacao
TCM_043051
N
0.678
GSMUA_Achr8G01980_001
Musa acuminata
GSMUA_Achr8G01980_001
I
0.677