PK16069.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK16069.1 T010086_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.760 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.746 0.940
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.727 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK16069.1 AP2 30 81

Links

Other AP2 family TFs
Other Cannabis sativa TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.806
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.806
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.787
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.769
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.760
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.760
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.760
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.760
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.760
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.760
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.760
mgf021045m Mimulus guttatus mgf021045m I 0.760
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.760
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.760
Cla014165 Citrullus lanatus Cla014165 I 0.760
Ca_25824 Cicer arietinum Ca_25824 I 0.760
TCM_035077 Theobroma cacao TCM_035077 I 0.760
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.760
Pm004870 Prunus mume Pm004870 I 0.760
29908.m006165 Ricinus communis 29908.m006165 I 0.760
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.760
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.760
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.760
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.760
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.760
Bra040309 Brassica rapa Bra040309 I 0.760
MDP0000923690 Malus domestica MDP0000923690 I 0.760
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.760
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.760
ERF014 Arabidopsis thaliana AT1G44830 D 0.760
Bo6g004620 Brassica oleracea Bo6g004620 I 0.760
MDP0000120147 Malus domestica MDP0000120147 I 0.760
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.760
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.760
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.760
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.760
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.760
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.760
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.759
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.757
Cla023512 Citrullus lanatus Cla023512 I 0.757
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.757
Bo6g121400 Brassica oleracea Bo6g121400 I 0.755
Bra015660 Brassica rapa Bra015660 I 0.755
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.755
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.754
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.754
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.753
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.753
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.750
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.747
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.747
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.747
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.747
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.747
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.747
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.747
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.747
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.747
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.747
OS02G0767800 Oryza sativa OS02G0767800 I 0.747
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.747
F775_17148 Aegilops tauschii F775_17148 I 0.746
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.746
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.746
Bra036022 Brassica rapa Bra036022 I 0.746
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.746
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.746
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.746
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.746
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.746
ERF012 Arabidopsis thaliana AT1G21910 D 0.746
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.745
Bo5g034880 Brassica oleracea Bo5g034880 I 0.744
mgf023290m Mimulus guttatus mgf023290m I 0.744
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.740
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.739
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.738
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.738
Si007977m.g Setaria italica Si007977m.g I 0.738
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.737
Bra016400 Brassica rapa Bra016400 I 0.736
Bo8g071150 Brassica oleracea Bo8g071150 I 0.736
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.736
F775_20580 Aegilops tauschii F775_20580 I 0.734
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.733
MDP0000319736 Malus domestica MDP0000319736 I 0.732
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.732
Bra012298 Brassica rapa Bra012298 I 0.727
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.727
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.727
ERF013 Arabidopsis thaliana AT1G77640 D 0.727
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.723
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.718
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.718
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.718
Si039170m.g Setaria italica Si039170m.g I 0.718
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.718
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.716
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.716
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.711
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.699
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.696
Bo7g059990 Brassica oleracea Bo7g059990 I 0.694
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.689
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.689
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.689
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.689
OBART06G07000 Oryza barthii OBART06G07000 I 0.689
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.689
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.689