PK18548.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK18548.1 T010091_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.748 0.953
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.748 0.953
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.748 0.930
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.748 0.930
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK18548.1 AP2 27 71

Links

Other AP2 family TFs
Other Cannabis sativa TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.725
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.758
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.687
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.748
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.748
ERF016 Arabidopsis thaliana AT5G21960 I 0.681
ERF018 Arabidopsis thaliana AT1G74930 D 0.748
ERF017 Arabidopsis thaliana AT1G19210 D 0.748
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.724
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.687
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.748
Bo9g149820 Brassica oleracea Bo9g149820 I 0.687
Bo8g102870 Brassica oleracea Bo8g102870 I 0.748
Bo8g068370 Brassica oleracea Bo8g068370 I 0.733
Bo6g119120 Brassica oleracea Bo6g119120 I 0.746
Bo6g086740 Brassica oleracea Bo6g086740 I 0.740
Bo3g015600 Brassica oleracea Bo3g015600 I 0.687
Bo2g023630 Brassica oleracea Bo2g023630 I 0.702
Bra031069 Brassica rapa Bra031069 I 0.748
Bra025719 Brassica rapa Bra025719 I 0.712
Bra002377 Brassica rapa Bra002377 I 0.687
Bra003780 Brassica rapa Bra003780 I 0.740
Bra006599 Brassica rapa Bra006599 I 0.687
Bra015882 Brassica rapa Bra015882 I 0.740
Bra016518 Brassica rapa Bra016518 I 0.733
Bra020162 Brassica rapa Bra020162 I 0.702
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.740
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.748
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.740
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.748
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.687
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.750
Ca_09124 Cicer arietinum Ca_09124 I 0.736
Ca_19295 Cicer arietinum Ca_19295 I 0.693
Ca_19296 Cicer arietinum Ca_19296 I 0.688
Ca_19297 Cicer arietinum Ca_19297 I 0.691
Ca_01683 Cicer arietinum Ca_01683 I 0.722
Cla007584 Citrullus lanatus Cla007584 I 0.722
Cla011318 Citrullus lanatus Cla011318 I 0.721
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.743
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.735
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.743
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.721
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.699
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.742
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.692
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.733
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.682
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.748
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.730
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.748
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.729
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.716
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.727
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.708
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.708
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.721
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.725
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.721
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.692
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.733
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.745
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.721
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.743
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.724
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.742
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.730
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.730
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.734
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.734
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.736
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.712
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.689
MDP0000704216 Malus domestica MDP0000704216 I 0.737
MDP0000649022 Malus domestica MDP0000649022 I 0.731
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.737
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.733
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.746
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.739
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.691
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.705
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.679
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.731
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.679
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.691
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.731
mgf025452m Mimulus guttatus mgf025452m I 0.728
mgf024162m Mimulus guttatus mgf024162m I 0.744
mgf021940m Mimulus guttatus mgf021940m I 0.740
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.736
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.684
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.708
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.706
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.706
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.706
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.706
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.706
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.706
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.706
OS02G0781300 Oryza sativa OS02G0781300 I 0.706
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.730
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.730
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.733
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.732
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.748
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.727
Pm027117 Prunus mume Pm027117 I 0.734
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.734
29739.m003647 Ricinus communis 29739.m003647 I 0.717
29739.m003716 Ricinus communis 29739.m003716 I 0.734
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.748
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.748
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.748
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.725
Si019636m.g Setaria italica Si019636m.g I 0.730
Si008104m.g Setaria italica Si008104m.g I 0.698
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.724
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.677
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.724
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.677
TCM_037415 Theobroma cacao TCM_037415 I 0.733
TCM_037486 Theobroma cacao TCM_037486 I 0.760
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.708
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.708
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.758
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.748
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.724