PK25211.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK25211.1 T010102_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.745 0.872
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.745 0.872
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.745 0.872
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.731 0.830
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.731 0.830
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.731 0.830
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.709 0.809
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.678 0.702
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.678 0.702
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.678 0.702
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK25211.1 AP2 38 89

Links

Other AP2 family TFs
Other Cannabis sativa TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27904.m000217 Ricinus communis 27904.m000217 I 0.684
29640.m000403 Ricinus communis 29640.m000403 I 0.809
30190.m011323 Ricinus communis 30190.m011323 I 0.709
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.735
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.701
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.715
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.800
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.704
ERF12 Arabidopsis thaliana AT1G28360 I 0.702
ERF3 Arabidopsis thaliana AT1G50640 D 0.745
ERF13 Arabidopsis thaliana AT2G44840 D 0.678
ERF7 Arabidopsis thaliana AT3G20310 D 0.731
Bo1g102220 Brassica oleracea Bo1g102220 I 0.677
Bo1g108970 Brassica oleracea Bo1g108970 I 0.687
Bo3g066710 Brassica oleracea Bo3g066710 I 0.684
Bo3g074840 Brassica oleracea Bo3g074840 I 0.709
Bo3g143340 Brassica oleracea Bo3g143340 I 0.702
Bo4g024140 Brassica oleracea Bo4g024140 I 0.678
Bo4g195220 Brassica oleracea Bo4g195220 I 0.678
Bo5g055840 Brassica oleracea Bo5g055840 I 0.702
Bo5g109800 Brassica oleracea Bo5g109800 I 0.684
Bo6g022410 Brassica oleracea Bo6g022410 I 0.781
Bo7g048190 Brassica oleracea Bo7g048190 I 0.702
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.702
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.691
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.731
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.696
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.684
Bra001588 Brassica rapa Bra001588 I 0.684
Bra001784 Brassica rapa Bra001784 I 0.709
Bra004873 Brassica rapa Bra004873 I 0.678
Bra010881 Brassica rapa Bra010881 I 0.702
Bra018864 Brassica rapa Bra018864 I 0.740
Bra023748 Brassica rapa Bra023748 I 0.677
Bra030094 Brassica rapa Bra030094 I 0.702
Bra032898 Brassica rapa Bra032898 I 0.702
Bra035792 Brassica rapa Bra035792 I 0.684
Bra037630 Brassica rapa Bra037630 I 0.678
Bra038261 Brassica rapa Bra038261 I 0.687
Bra039658 Brassica rapa Bra039658 I 0.682
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.701
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.704
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.749
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.678
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.701
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.746
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.702
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.746
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.702
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.701
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.677
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.678
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.750
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.684
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.709
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.786
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.709
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.707
Ca_00326 Cicer arietinum Ca_00326 I 0.709
Ca_12205 Cicer arietinum Ca_12205 I 0.723
Ca_17824 Cicer arietinum Ca_17824 I 0.728
Ca_20544 Cicer arietinum Ca_20544 I 0.688
Ca_22534 Cicer arietinum Ca_22534 I 0.683
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.733
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.785
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.689
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.709
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.817
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.684
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.809
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.709
Cla003319 Citrullus lanatus Cla003319 I 0.764
Cla005423 Citrullus lanatus Cla005423 I 0.778
Cla013723 Citrullus lanatus Cla013723 I 0.743
Cla020002 Citrullus lanatus Cla020002 I 0.709
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.770
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.709
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.753
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.764
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.679
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.682
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.682
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.721
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.742
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.682
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.686
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.807
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.684
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.795
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.709
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.688
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.721
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.680
e_gw1.5.258.1 Physcomitrella patens e_gw1.5.258.1 I 0.680
F775_20810 Aegilops tauschii F775_20810 I 0.680
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I 0.684
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.702
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.731
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.685
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.681
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.808
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.733
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.678
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.713
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.709
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.772
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.764
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.747
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.723
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.700
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.715
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.684
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.709
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.735
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.772
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.709
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.700
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.754
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.694
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.759
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.684
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.735
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.709
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.725
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.699
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.750
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.749
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.698
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.779
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.728
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.726
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.769
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.758
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.726
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.769
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.726
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.707
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.730
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.684
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.752
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.684
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.720
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.750
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.682
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.778
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.748
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.692
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.778
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.681
MDP0000236605 Malus domestica MDP0000236605 I 0.693
MDP0000243113 Malus domestica MDP0000243113 I 0.783
MDP0000310904 Malus domestica MDP0000310904 I 0.693
MDP0000457509 Malus domestica MDP0000457509 I 0.703
MDP0000542633 Malus domestica MDP0000542633 I 0.805
MDP0000629527 Malus domestica MDP0000629527 I 0.805
MDP0000744693 Malus domestica MDP0000744693 I 0.783
MDP0000839828 Malus domestica MDP0000839828 I 0.808
mgf007166m Mimulus guttatus mgf007166m I 0.808
mgf016282m Mimulus guttatus mgf016282m I 0.808
mgf023367m Mimulus guttatus mgf023367m I 0.709
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.703
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.709
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.678
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.742
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.742
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.750
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.809
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.684
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.709
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.817
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.742
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.742
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.749
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.749
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.691
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.719
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.693
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.693
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.693
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.738
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.806
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.810
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.709
PK02998.1 Cannabis sativa PK02998.1 I 0.723
PK17878.1 Cannabis sativa PK17878.1 D 0.709
PK23186.1 Cannabis sativa PK23186.1 I 0.681
Pm010083 Prunus mume Pm010083 I 0.709
Pm011907 Prunus mume Pm011907 I 0.805
Pm014953 Prunus mume Pm014953 I 0.808
Pm020210 Prunus mume Pm020210 I 0.717
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.809
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.683
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.716
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.709
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.704
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.709
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.683
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.808
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.788
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.709
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.717
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.709
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.709
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.790
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.790
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.683
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.721
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.749
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.678
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.706
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.706
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.684
SELMODRAFT_402810 Selaginella moellendorffii SELMODRAFT_402810 I 0.678
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.703
SELMODRAFT_439762 Selaginella moellendorffii SELMODRAFT_439762 I 0.678
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.703
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.713
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.684
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.713
Si003053m.g Setaria italica Si003053m.g I 0.704
Si036615m.g Setaria italica Si036615m.g I 0.680
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.709
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.729
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.818
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.814
TCM_029823 Theobroma cacao TCM_029823 I 0.709
TCM_030804 Theobroma cacao TCM_030804 I 0.755
TCM_031608 Theobroma cacao TCM_031608 I 0.684
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.678
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.702
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.753
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.754
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.677
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.704
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.726
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.709
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.810
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.724
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.774