chr1.CM0033.300.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0033.300.nc T010136_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.853 0.959
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.843 0.949
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.835 0.949
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.819 0.867
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0033.300.nc AP2 123 172
chr1.CM0033.300.nc AP2 215 266

Links

Other AP2 family TFs
Other Lotus japonicus TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_17614 Aegilops tauschii F775_17614 N 0.000
gene24516-v1.0-hybrid Fragaria vesca gene24516-v1.0-hybrid N 0.000
GRMZM2G089686 Zea mays GRMZM2G089686 I 0.000
GRMZM2G177760 Zea mays GRMZM2G177760 N 0.000
GRMZM2G433450 Zea mays GRMZM2G433450 N 0.000
MLOC_23224 Hordeum vulgare MLOC_23224 N 0.000
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.000
ORGLA05G0226800 Oryza glaberrima ORGLA05G0226800 N 0.000
OS08G0548000 Oryza sativa OS08G0548000 N 0.000
Pavir.Da00862 Panicum virgatum Pavir.Da00862 N 0.000
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.000