chr1.CM0133.1010.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0133.1010.nc T010138_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.751 0.880
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.751 0.880
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.729 0.820
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.729 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0133.1010.nc AP2 10 61

Links

Other AP2 family TFs
Other Lotus japonicus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.788
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.788
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.777
Ca_01683 Cicer arietinum Ca_01683 I 0.777
TCM_037415 Theobroma cacao TCM_037415 I 0.767
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.763
Ca_09124 Cicer arietinum Ca_09124 I 0.763
Bra016518 Brassica rapa Bra016518 I 0.761
Bo8g068370 Brassica oleracea Bo8g068370 I 0.761
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.759
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.759
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.756
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.755
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.755
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.755
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.755
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.754
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.754
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.754
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.754
29739.m003716 Ricinus communis 29739.m003716 I 0.753
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.753
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.753
Pm027117 Prunus mume Pm027117 I 0.753
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.753
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.752
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.751
ERF017 Arabidopsis thaliana AT1G19210 D 0.751
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.751
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.751
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.751
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.750
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.749
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.749
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.749
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.748
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.748
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.747
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.747
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.747
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.747
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.745
29739.m003647 Ricinus communis 29739.m003647 I 0.744
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.742
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.740
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.740
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.740
Bo8g102870 Brassica oleracea Bo8g102870 I 0.737
Bra031069 Brassica rapa Bra031069 I 0.737
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.737
MDP0000649022 Malus domestica MDP0000649022 I 0.737
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.737
Ca_19295 Cicer arietinum Ca_19295 I 0.736
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.736
TCM_037486 Theobroma cacao TCM_037486 I 0.735
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.734
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.734
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.733
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.733
Cla011318 Citrullus lanatus Cla011318 I 0.732
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.732
Ca_19296 Cicer arietinum Ca_19296 I 0.731
mgf024162m Mimulus guttatus mgf024162m I 0.731
MDP0000704216 Malus domestica MDP0000704216 I 0.730
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.730
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.730
ERF018 Arabidopsis thaliana AT1G74930 D 0.729
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.729
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.729
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.729
mgf021940m Mimulus guttatus mgf021940m I 0.729
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.729
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.729
Bra015882 Brassica rapa Bra015882 I 0.728
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.727
Bo6g119120 Brassica oleracea Bo6g119120 I 0.726
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.722
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.721
Bo6g086740 Brassica oleracea Bo6g086740 I 0.721
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.721
Bra003780 Brassica rapa Bra003780 I 0.721
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.721
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.720
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.720
Si019636m.g Setaria italica Si019636m.g I 0.720
Cla007584 Citrullus lanatus Cla007584 I 0.719
mgf025452m Mimulus guttatus mgf025452m I 0.718
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.717
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.716
Bo3g015600 Brassica oleracea Bo3g015600 I 0.715
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.715
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.715
Bra006599 Brassica rapa Bra006599 I 0.715
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.714
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.714
Bra002377 Brassica rapa Bra002377 I 0.714
Bo9g149820 Brassica oleracea Bo9g149820 I 0.714
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.714
PK18548.1 Cannabis sativa PK18548.1 I 0.712
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.711
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.711
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.710
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.709
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.709
ERF016 Arabidopsis thaliana AT5G21960 I 0.708
Ca_19297 Cicer arietinum Ca_19297 I 0.708
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.705
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.705
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.705
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.705
OS02G0781300 Oryza sativa OS02G0781300 I 0.705
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.705
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.705
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.705
Bo2g023630 Brassica oleracea Bo2g023630 I 0.704
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.703
Bra020162 Brassica rapa Bra020162 I 0.703
Bra025719 Brassica rapa Bra025719 I 0.701
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.697
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.697
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.696
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.693
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.692
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.685
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.683
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.683
Cla022291 Citrullus lanatus Cla022291 I 0.683
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.683
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.677