chr1.CM0295.160.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0295.160.nd T010145_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.720 0.812
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.700 0.750
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0295.160.nd AP2 79 130

Links

Other AP2 family TFs
Other Lotus japonicus TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29739.m003647 Ricinus communis 29739.m003647 I 0.000
29739.m003716 Ricinus communis 29739.m003716 I 0.000
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.000
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.000
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.000
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.000
Bo6g086740 Brassica oleracea Bo6g086740 I 0.000
Bo6g119120 Brassica oleracea Bo6g119120 I 0.000
Bo8g068370 Brassica oleracea Bo8g068370 I 0.000
Bo8g102870 Brassica oleracea Bo8g102870 I 0.000
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.000
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.000
Bra003780 Brassica rapa Bra003780 I 0.000
Bra015882 Brassica rapa Bra015882 I 0.000
Bra016518 Brassica rapa Bra016518 I 0.000
Bra031069 Brassica rapa Bra031069 I 0.000
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.000
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.000
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.000
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.000
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.000
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.000
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.000
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.000
Ca_01683 Cicer arietinum Ca_01683 I 0.000
Ca_09124 Cicer arietinum Ca_09124 I 0.000
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.000
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.000
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.000
Cla007584 Citrullus lanatus Cla007584 I 0.000
Cla011318 Citrullus lanatus Cla011318 I 0.000
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.000
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.000
ERF017 Arabidopsis thaliana AT1G19210 D 0.000
ERF018 Arabidopsis thaliana AT1G74930 D 0.000
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.000
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.000
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.000
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.000
F775_23111 Aegilops tauschii F775_23111 I 0.000
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.000
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.000
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.000
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.000
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.000
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.000
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.000
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.000
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.000
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.000
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.000
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.000
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.000
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.000
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.000
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.000
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.000
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.000
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.000
MDP0000649022 Malus domestica MDP0000649022 I 0.000
mgf021940m Mimulus guttatus mgf021940m I 0.000
mgf024162m Mimulus guttatus mgf024162m I 0.000
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.000
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.000
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.000
OB08G24280 Oryza brachyantha OB08G24280 I 0.000
OBART06G06190 Oryza barthii OBART06G06190 I 0.000
OBART06G06230 Oryza barthii OBART06G06230 N 0.000
OBART08G16950 Oryza barthii OBART08G16950 I 0.000
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.000
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.000
OGLUM06G06550 Oryza glumaepatula OGLUM06G06550 N 0.000
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.000
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.000
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.000
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.000
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.000
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.000
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.000
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.000
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.000
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.000
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.000
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.000
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.000
ORGLA06G0057400 Oryza glaberrima ORGLA06G0057400 N 0.000
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.000
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.000
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.000
OS02G0781300 Oryza sativa OS02G0781300 I 0.000
OS08G0454000 Oryza sativa OS08G0454000 I 0.000
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.000
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.000
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.000
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.000
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.000
Pm027117 Prunus mume Pm027117 I 0.000
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.000
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.000
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.000
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.000
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.000
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.000
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.000
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.000
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.000
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.000
Si008104m.g Setaria italica Si008104m.g I 0.000
Si015027m.g Setaria italica Si015027m.g I 0.000
Si019636m.g Setaria italica Si019636m.g I 0.000
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.000
TCM_037415 Theobroma cacao TCM_037415 I 0.000
TCM_037486 Theobroma cacao TCM_037486 I 0.000
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.000
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.000
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.000
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.000