chr1.CM0318.570.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0318.570.nd T010147_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.788 0.960
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.752 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0318.570.nd AP2 30 81

Links

Other AP2 family TFs
Other Lotus japonicus TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK08602.1 Cannabis sativa PK08602.1 D 0.788
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.788
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.785
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.785
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.785
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.785
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.785
Ca_07264 Cicer arietinum Ca_07264 I 0.785
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.785
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.785
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.785
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.785
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.785
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.785
Cla017778 Citrullus lanatus Cla017778 I 0.785
27810.m000639 Ricinus communis 27810.m000639 I 0.785
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.782
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.781
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.781
DREB2E Oryza sativa OS03G0174400 I 0.781
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.781
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.781
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.781
OBART03G05550 Oryza barthii OBART03G05550 I 0.781
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.781
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.781
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.781
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.781
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.781
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.781
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.781
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.781
MDP0000871361 Malus domestica MDP0000871361 I 0.779
MDP0000703626 Malus domestica MDP0000703626 I 0.779
Pm025865 Prunus mume Pm025865 I 0.779
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.779
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.778
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.777
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.777
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.776
TCM_024756 Theobroma cacao TCM_024756 I 0.776
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.776
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.775
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.771
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.769
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.768
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.766
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.763
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.762
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.760
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.759
Bo6g073020 Brassica oleracea Bo6g073020 I 0.756
Bo8g092010 Brassica oleracea Bo8g092010 I 0.755
Bra007341 Brassica rapa Bra007341 I 0.755
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.752
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.752
DREB2F Arabidopsis thaliana AT3G57600 D 0.752
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.752
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.752
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.746
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.745
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.745
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.741
Bo4g111040 Brassica oleracea Bo4g111040 I 0.737
Bra014617 Brassica rapa Bra014617 I 0.737
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.731
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.722
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.692
MDP0000880312 Malus domestica MDP0000880312 I 0.678