chr3.CM0080.190.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr3.CM0080.190.nd T010178_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.700 0.735
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.691 0.796
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.691 0.796
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.691 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0080.190.nd AP2 92 144

Links

Other AP2 family TFs
Other Lotus japonicus TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.766
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.761
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.750
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.740
Ca_06034 Cicer arietinum Ca_06034 I 0.740
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.740
Ca_06032 Cicer arietinum Ca_06032 I 0.732
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.732
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.732
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.730
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.713
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.711
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.708
Cla021851 Citrullus lanatus Cla021851 I 0.707
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.704
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.704
MDP0000830129 Malus domestica MDP0000830129 I 0.704
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.703
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.702
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.702
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.701
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.701
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.701
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.701
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.700
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.700
MDP0000930655 Malus domestica MDP0000930655 I 0.700
ERF098 Arabidopsis thaliana AT3G23230 D 0.700
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.700
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.700
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.699
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.699
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.698
GLYMA18G48741 Glycine max GLYMA18G48741 I 0.697
TCM_005706 Theobroma cacao TCM_005706 I 0.697
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.696
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.694
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.694
Pm017696 Prunus mume Pm017696 I 0.693
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.693
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.693
Ca_12080 Cicer arietinum Ca_12080 I 0.692
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.692
Bra037630 Brassica rapa Bra037630 I 0.691
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.691
Bra004873 Brassica rapa Bra004873 I 0.691
Bo4g195220 Brassica oleracea Bo4g195220 I 0.691
Bo4g024140 Brassica oleracea Bo4g024140 I 0.691
30174.m008755 Ricinus communis 30174.m008755 I 0.691
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.691
ERF13 Arabidopsis thaliana AT2G44840 D 0.691
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.691
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.691
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.690
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.690
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.690
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.690
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.689
Pm017699 Prunus mume Pm017699 I 0.689
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.689
Bo9g001020 Brassica oleracea Bo9g001020 I 0.688
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.687
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.687
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.685
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.685
mgf021973m Mimulus guttatus mgf021973m I 0.684
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.684
TCM_005707 Theobroma cacao TCM_005707 I 0.684
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.683
Pm020605 Prunus mume Pm020605 I 0.683
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.683
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.683
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.683
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.682
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.682
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.682
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.681
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.680
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.679
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.679
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.678
30174.m008756 Ricinus communis 30174.m008756 I 0.678
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.678