chr3.CM0423.200.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr3.CM0423.200.nd T010186_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0423.200.nd AP2 20 68

Links

Other AP2 family TFs
Other Lotus japonicus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000300382 Malus domestica MDP0000300382 N 0.766
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.766
MDP0000675982 Malus domestica MDP0000675982 N 0.766
MDP0000129941 Malus domestica MDP0000129941 N 0.766
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.766
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.766
Ca_11707 Cicer arietinum Ca_11707 N 0.763
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.760
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.760
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.758
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.757
Pm020315 Prunus mume Pm020315 N 0.756
TCM_002835 Theobroma cacao TCM_002835 N 0.756
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.756
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.756
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.756
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.756
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.756
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.756
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.756
Cla002744 Citrullus lanatus Cla002744 N 0.753
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.750
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.750
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.750
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.747
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.747
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.745
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.745
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.744
mgf007349m Mimulus guttatus mgf007349m N 0.744
mgf003491m Mimulus guttatus mgf003491m N 0.744
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.741
OBART02G17450 Oryza barthii OBART02G17450 N 0.739
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.739
OS02G0499000 Oryza sativa OS02G0499000 N 0.739
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.739
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.739
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.739
OB02G25330 Oryza brachyantha OB02G25330 N 0.739
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.739
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.739
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.739
Cla015151 Citrullus lanatus Cla015151 N 0.738
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.738
Ca_17230 Cicer arietinum Ca_17230 N 0.737
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.735
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.734
PK01824.1 Cannabis sativa PK01824.1 N 0.734
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.733
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.733
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.733
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.733
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.733
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.733
Si018306m.g Setaria italica Si018306m.g N 0.733
Bo8g033910 Brassica oleracea Bo8g033910 N 0.729
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.729
Bra034895 Brassica rapa Bra034895 N 0.729
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.729
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.729
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.729
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.729
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.727
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.727
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.727
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.716
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.714
Bo11579s010 Brassica oleracea Bo11579s010 N 0.713
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.708
mgf003727m Mimulus guttatus mgf003727m N 0.694
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.688